RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 PPM1KQ8N3J5 372 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 KAT5Q92993 513 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 KREMEN1Q96MU8 473 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 HSD3B7Q9H2F3 369 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 KRT82Q9NSB4 513 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 FAM49BQ9NUQ9 324 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 FANCLQ9NW38 375 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 COMMD8Q9NX08 183 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 TECTAO75443 2155 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 NCANO14594 1321 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 LRRC10BA6NIK2 292 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 HHLA1C9JL84 531 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 PAEPP09466 180 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 ZNF18P17022 549 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 SLC9A1P19634 815 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 ZNF132P52740 706 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 SIGLEC14Q08ET2 396 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 EXOC3L4Q17RC7 722 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 ZNF394Q53GI3 561 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 ARHGAP15Q53QZ3 475 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 TANGO2Q6ICL3 276 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 TRIM67Q6ZTA4 783 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 CLEC20AQ6ZU45 233 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 MON1AQ86VX9 555 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 CREBRFQ8IUR6 639 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 NUP93Q8N1F7 819 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 ZSCAN18Q8TBC5 510 aaPredicted RBP18.34■□□□□ 0.53
USB1-209ENST00000564387 E2F7Q96AV8 911 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 ASIC4Q96FT7 647 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 FAM81BQ96LP2 452 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 HEXIM2Q96MH2 286 aaKnown RBP18.34■□□□□ 0.53
USB1-209ENST00000564387 MED10Q9BTT4 135 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 C1QTNF1Q9BXJ1 281 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 SLC46A2Q9BY10 475 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 SMOC2Q9H3U7 446 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 ZFP14Q9HCL3 533 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 SLC2A4RGQ9NR83 387 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 OBP2AQ9NY56 170 aa18.34■□□□□ 0.53
USB1-209ENST00000564387 MAGED2Q9UNF1 606 aaPredicted RBP18.34■□□□□ 0.53
USB1-209ENST00000564387 ZNF638Q14966 1978 aaKnown RBP18.33■□□□□ 0.53
USB1-209ENST00000564387 NUP210Q8TEM1 1887 aaPredicted RBP18.33■□□□□ 0.53
USB1-209ENST00000564387 PATJQ8NI35 1801 aa18.33■□□□□ 0.53
USB1-209ENST00000564387 RNF225M0QZC1 329 aaPredicted RBP18.33■□□□□ 0.52
USB1-209ENST00000564387 RTN3O95197 1032 aaPredicted RBP18.33■□□□□ 0.52
USB1-209ENST00000564387 FAM200BP0CF97 657 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 SRFP11831 508 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 PPP3CCP48454 512 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 CYP4F8P98187 520 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 SKOR2Q2VWA4 1001 aaPredicted RBP18.33■□□□□ 0.52
USB1-209ENST00000564387 HSP90AA4PQ58FG1 418 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 GPR158Q5T848 1215 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 SNX30Q5VWJ9 437 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 RRAGAQ7L523 313 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 ENOSF1Q7L5Y1 443 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 BMP8AQ7Z5Y6 402 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 OVCA2Q8WZ82 227 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 GCNAQ96QF7 691 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 CRACR2AQ9BSW2 395 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 DUSP16Q9BY84 665 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 PLA2G2FQ9BZM2 168 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 UBXN6Q9BZV1 441 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 SIX2Q9NPC8 291 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 APEX2Q9UBZ4 518 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 ANAPC1Q9H1A4 1944 aa18.33■□□□□ 0.52
USB1-209ENST00000564387 VDRP11473 427 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 NPR3P17342 541 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 PFKLP17858 780 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 ADORA2BP29275 332 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 KCNMA1Q12791 1236 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 ANO6Q4KMQ2 910 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 ARID3BQ8IVW6 561 aaPredicted RBP18.32■□□□□ 0.52
USB1-209ENST00000564387 CMTM8Q8IZV2 173 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 ANKRD52Q8NB46 1076 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 MRPS31Q92665 395 aaKnown RBP18.32■□□□□ 0.52
USB1-209ENST00000564387 RSPRY1Q96DX4 576 aa18.32■□□□□ 0.52
USB1-209ENST00000564387 NAT10Q9H0A0 1025 aaKnown RBP18.32■□□□□ 0.52
USB1-209ENST00000564387 UBE2TQ9NPD8 197 aaPredicted RBP18.32■□□□□ 0.52
USB1-209ENST00000564387 LIMA1Q9UHB6 759 aaKnown RBP18.32■□□□□ 0.52
USB1-209ENST00000564387 ZNF840PA6NDX5 716 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 NARSO43776 548 aaKnown RBP18.31■□□□□ 0.52
USB1-209ENST00000564387 ZDHHC11BP0C7U3 371 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 SLC5A3P53794 718 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 MAP3K7CLP57077 242 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 ZNF268Q14587 947 aaPredicted RBP18.31■□□□□ 0.52
USB1-209ENST00000564387 KRT31Q15323 416 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 PKDCCQ504Y2 493 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 TMEM270Q6UE05 265 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 VITQ6UXI7 678 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 APTXQ7Z2E3 356 aaKnown RBP18.31■□□□□ 0.52
USB1-209ENST00000564387 MFSD6LQ8IWD5 586 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 ST13P5Q8NFI4 369 aaPredicted RBP18.31■□□□□ 0.52
USB1-209ENST00000564387 SCAMP5Q8TAC9 235 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 KXD1Q9BQD3 176 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 ZSWIM1Q9BR11 485 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 SLITRK6Q9H5Y7 841 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 WNT16Q9UBV4 365 aa18.31■□□□□ 0.52
USB1-209ENST00000564387 PRR33A8MZF0 331 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 O00370 1275 aa18.3■□□□□ 0.52
USB1-209ENST00000564387 OLFM2O95897 454 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms