RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 LRRC55Q6ZSA7 311 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 MAATS1Q7Z4T9 603 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 C2CD5Q86YS7 1000 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 RASGRP3Q8IV61 690 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 NRSN1Q8IZ57 195 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 PCYOX1LQ8NBM8 494 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 RUBCNQ92622 972 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TWNKQ96RR1 684 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 REXO4Q9GZR2 422 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 SLC25A32Q9H2D1 315 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 NDRG4Q9ULP0 352 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 SH3BP1Q9Y3L3 701 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 LMTK3Q96Q04 1460 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 B4E171 279 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 H0Y3Z8 333 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CCNT2O60583 730 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 FARP2O94887 1054 aaPredicted RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 LDHCP07864 332 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 GYS1P13807 737 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CHRM3P20309 590 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CAPN3P20807 821 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 PPIFP30405 207 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 TSPAN7P41732 249 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CCR5P51681 352 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 RABGGTBP53611 331 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 SEC24CP53992 1094 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CUL4BQ13620 913 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 PTCHD3Q3KNS1 767 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CACHD1Q5VU97 1274 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 ABLIM2Q6H8Q1 611 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 LAYNQ6UX15 382 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TBC1D1Q86TI0 1168 aaPredicted RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 ELOA2Q8IYF1 753 aaPredicted RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 FAM109AQ8N4B1 249 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 ESX1Q8N693 406 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 MBD3L2Q8NHZ7 208 aaPredicted RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 TMEM176AQ96HP8 235 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 KCNC2Q96PR1 638 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TRAPPC9Q96Q05 1148 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 NUDT22Q9BRQ3 303 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 PTDSS2Q9BVG9 487 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 SLC26A6Q9BXS9 759 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 POGKQ9P215 609 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 COL15A1P39059 1388 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 DIRC3C9JPN6 131 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 USP1O94782 785 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 CNPP09543 421 aaKnown RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 ELF1P32519 619 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 ZEB1P37275 1124 aaPredicted RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 KCNC1P48547 511 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 AARSP49588 968 aaKnown RBP eCLIP2.97□□□□□ -1.933e-6■■■■■ 61.8
CHD9-209ENST00000564255 TUBP50607 506 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 ANXA11P50995 505 aaKnown RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 TIAL1Q01085 375 aaKnown RBP eCLIP2.97□□□□□ -1.933e-8■■■■■ 28.9
CHD9-209ENST00000564255 SATB1Q01826 763 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 KRT17Q04695 432 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 FOXL1Q12952 345 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 KCNA10Q16322 511 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 ATPAF1Q5TC12 328 aaPredicted RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 MZT2BQ6NZ67 158 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 RSRC2Q7L4I2 434 aaKnown RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 RAB11FIP2Q7L804 512 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 RNPEPQ9H4A4 650 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 CXorf36Q9H7Y0 433 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 G6PC2Q9NQR9 355 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 VPS45Q9NRW7 570 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 RPS6KL1Q9Y6S9 549 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 ADM5C9JUS6 153 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 SNX2O60749 519 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 CSF1RP07333 972 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 SPATA31D3P0C874 917 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 BCAT1P54687 386 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 NHLH2Q02577 135 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 CHRNDQ07001 517 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 NT5DC1Q5TFE4 455 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 ANKRD45Q5TZF3 282 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 SFRP4Q6FHJ7 346 aaPredicted RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 FAM180BQ6P0A1 224 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 SPATA31D4Q6ZUB0 917 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 SP8Q8IXZ3 490 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 FUKQ8N0W3 1084 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 TSPYL6Q8N831 410 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 NSUN7Q8NE18 718 aaKnown RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 DNAJB14Q8TBM8 379 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 MIEF2Q96C03 454 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 WDR24Q96S15 920 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 OSBPL9Q96SU4 736 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 ZCWPW1Q9H0M4 648 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 OSBPL5Q9H0X9 879 aaPredicted RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 VPS16Q9H269 839 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 ALG13Q9NP73 1137 aaKnown RBP2.97□□□□□ -1.93
CHD9-209ENST00000564255 DNAJB11Q9UBS4 358 aa2.97□□□□□ -1.93
CHD9-209ENST00000564255 A0A1W2PS29 197 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 GXYLT2A0PJZ3 443 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 PRSS47A8MTI9 375 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 F5H0A9 414 aaPredicted RBP2.96□□□□□ -1.94
CHD9-209ENST00000564255 LEFTY2O00292 366 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 CBFA2T3O75081 653 aa2.96□□□□□ -1.94
CHD9-209ENST00000564255 HLA-DOAP06340 250 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms