RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 CMTM8Q8IZV2 173 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 NUP93Q8N1F7 819 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 DEPDC1BQ8WUY9 529 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 TMEM176AQ96HP8 235 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 NT5C1BQ96P26 610 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 TRMT61BQ9BVS5 477 aaKnown RBP21.51■■□□□ 1.03
CMTM3-206ENST00000563672 OBP2AQ9NY56 170 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 IL37Q9NZH6 218 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 PRAMEF12O95522 483 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 NPR3P17342 541 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 ADORA2BP29275 332 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 PFKPQ01813 784 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 GRM2Q14416 872 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 CCDC183Q5T5S1 534 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 SIX5Q8N196 739 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 MAB21L3Q8N8X9 362 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 HEXIM2Q96MH2 286 aaKnown RBP21.5■■□□□ 1.03
CMTM3-206ENST00000563672 LRRC3BQ96PB8 259 aa21.5■■□□□ 1.03
CMTM3-206ENST00000563672 RTN3O95197 1032 aaPredicted RBP21.49■■□□□ 1.03
CMTM3-206ENST00000563672 FAM200BP0CF97 657 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 PPP3CCP48454 512 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 MAP3K7CLP57077 242 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 YWHAEP62258 255 aaKnown RBP21.49■■□□□ 1.03
CMTM3-206ENST00000563672 FCHO2Q0JRZ9 810 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 PPP1R26Q5T8A7 1209 aaPredicted RBP21.49■■□□□ 1.03
CMTM3-206ENST00000563672 IER5LQ5T953 404 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 CREBRFQ8IUR6 639 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 SMG9Q9H0W8 520 aaKnown RBP21.49■■□□□ 1.03
CMTM3-206ENST00000563672 COMMD8Q9NX08 183 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 TRPM5Q9NZQ8 1165 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 CA14Q9ULX7 337 aa21.49■■□□□ 1.03
CMTM3-206ENST00000563672 FAM92AA1XBS5 289 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 ZNF840PA6NDX5 716 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 ACO1P21399 889 aaKnown RBP21.48■■□□□ 1.03
CMTM3-206ENST00000563672 YWHAQP27348 245 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 AVPR1AP37288 418 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 MTIF2P46199 727 aaKnown RBP21.48■■□□□ 1.03
CMTM3-206ENST00000563672 SLC5A3P53794 718 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 TAF10Q12962 218 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 SLC44A4Q53GD3 710 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 ARHGAP17Q68EM7 881 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 SASS6Q6UVJ0 657 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 CLEC20AQ6ZU45 233 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 ARHGEF19Q8IW93 802 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 FAM114A1Q8IWE2 563 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 PPM1KQ8N3J5 372 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 CELF5Q8N6W0 485 aaKnown RBP21.48■■□□□ 1.03
CMTM3-206ENST00000563672 SCAMP5Q8TAC9 235 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 ENOX1Q8TC92 643 aaKnown RBP21.48■■□□□ 1.03
CMTM3-206ENST00000563672 KAT5Q92993 513 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 USP13Q92995 863 aaPredicted RBP21.48■■□□□ 1.03
CMTM3-206ENST00000563672 INTS2Q9H0H0 1204 aaKnown RBP21.48■■□□□ 1.03
CMTM3-206ENST00000563672 TRPV5Q9NQA5 729 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 ARHGEF3Q9NR81 526 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 GCNT4Q9P109 453 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 TMEM63CQ9P1W3 806 aa21.48■■□□□ 1.03
CMTM3-206ENST00000563672 GREB1Q4ZG55 1949 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 C2orf78A6NCI8 922 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 HHLA1C9JL84 531 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 DPYSL4O14531 572 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 GDI1P31150 447 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 GCNT1Q02742 428 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 ZNF268Q14587 947 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-206ENST00000563672 PHLDB3Q6NSJ2 640 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 SUGP1Q8IWZ8 645 aaKnown RBP21.47■■□□□ 1.03
CMTM3-206ENST00000563672 DNASE1L2Q92874 299 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 IRF7Q92985 503 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 SLITRK1Q96PX8 696 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 SLC22A12Q96S37 553 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 CYP2S1Q96SQ9 504 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 DUSP16Q9BY84 665 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 MFSD1Q9H3U5 465 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 BRD9Q9H8M2 597 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 PNPLA8Q9NP80 782 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 SAMSN1Q9NSI8 373 aaKnown RBP21.47■■□□□ 1.03
CMTM3-206ENST00000563672 TDP1Q9NUW8 608 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 ANO10Q9NW15 660 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 CCL26Q9Y258 94 aa21.47■■□□□ 1.03
CMTM3-206ENST00000563672 GTPBP10A4D1E9 387 aaKnown RBP21.46■■□□□ 1.03
CMTM3-206ENST00000563672 ARNTLO00327 626 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 ZNF263O14978 683 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 CHADO15335 359 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 PFKLP17858 780 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 COL9A1P20849 921 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 CLCN5P51795 746 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 STARD6P59095 220 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 MAN2A1Q16706 1144 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 CWF19L1Q69YN2 538 aaKnown RBP21.46■■□□□ 1.03
CMTM3-206ENST00000563672 RRAGAQ7L523 313 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 ARL14EPQ8N8R7 260 aaPredicted RBP21.46■■□□□ 1.03
CMTM3-206ENST00000563672 BPIFB1Q8TDL5 484 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 OVCA2Q8WZ82 227 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 FBXO32Q969P5 355 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 TRPC7Q9HCX4 862 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 NFE2L3Q9Y4A8 694 aa21.46■■□□□ 1.03
CMTM3-206ENST00000563672 TRAV19A0A0A6YYK7 116 aa21.45■■□□□ 1.02
CMTM3-206ENST00000563672 USP17L7P0C7H9 530 aa21.45■■□□□ 1.02
CMTM3-206ENST00000563672 HDCP19113 662 aa21.45■■□□□ 1.02
CMTM3-206ENST00000563672 AVPR2P30518 371 aa21.45■■□□□ 1.02
CMTM3-206ENST00000563672 VCPP55072 806 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms