RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 SHCBP1LQ9BZQ2 653 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 JPH1Q9HDC5 661 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 MTO1Q9Y2Z2 717 aaKnown RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF536O15090 1300 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 LGR5O75473 907 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 MMP8P22894 467 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 HIRAP54198 1017 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 MCL1Q07820 350 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 BSPRYQ5W0U4 402 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 SAMD3Q8N6K7 520 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 RAB6BQ9NRW1 208 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 EURLQ9NYK6 297 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 TJP2Q9UDY2 1190 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 H0YCG3 227 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 GRAP2O75791 330 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 ACO1P21399 889 aaKnown RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 POLR2BP30876 1174 aaKnown RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CDKN2BP42772 138 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 SERPINB4P48594 390 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 EPHB1P54762 984 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 ACTR2P61160 394 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CDK16Q00536 496 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 SLC34A1Q06495 639 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 MTMR2Q13614 643 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CDCA2Q69YH5 1023 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 JOSD2Q8TAC2 188 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 VCPIP1Q96JH7 1222 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF395Q9H8N7 513 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CISHQ9NSE2 258 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 TAS2R1Q9NYW7 299 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 E7ENQ6 273 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 TBX10O75333 385 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 TMEM63AO94886 807 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 ABCD1P33897 745 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 RAP1GAPP47736 663 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 PAPOLAP51003 745 aaKnown RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CACNA2D1P54289 1103 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 SNRNP48Q6IEG0 339 aaKnown RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CASC4Q6P4E1 433 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 NIPA1Q7RTP0 329 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 OXNAD1Q96HP4 312 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 SERAC1Q96JX3 654 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 DRG1Q9Y295 367 aaKnown RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 NUMBLQ9Y6R0 609 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 WNK3Q9BYP7 1800 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 YDJCA8MPS7 323 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 TPP2P29144 1249 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 TNFSF9P41273 254 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 PTGER2P43116 358 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CDH6P55285 790 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 KRT81Q14533 505 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 TAF5Q15542 800 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CHI3L2Q15782 390 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 SLFN12LQ6IEE8 588 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 TAS1R3Q7RTX0 852 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 ALKBH8Q96BT7 664 aaKnown RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 CCDC124Q96CT7 223 aaKnown RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 FGD4Q96M96 766 aa12.35□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF277Q9NRM2 450 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-203ENST00000563623 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ITGAVP06756 1048 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 KRT7P08729 469 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF699Q32M78 642 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ZCCHC23Q6ZST2 131 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 PRPF39Q86UA1 669 aaKnown RBP12.34□□□□□ -0.43
ABCA3-203ENST00000563623 PCMTD2Q9NV79 361 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 LRCH1Q9Y2L9 728 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 RIPK3Q9Y572 518 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 A6NHS1 94 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 MEI4A8MW99 385 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 NDC80O14777 642 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 LIN7AO14910 233 aaPredicted RBP12.34□□□□□ -0.43
ABCA3-203ENST00000563623 TM9SF1O15321 606 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 HNRNPCL1O60812 293 aaKnown RBP12.34□□□□□ -0.43
ABCA3-203ENST00000563623 OPHN1O60890 802 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
ABCA3-203ENST00000563623 APRTP07741 180 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 AMPD1P23109 780 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ROR1Q01973 937 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 OASLQ15646 514 aaKnown RBP12.34□□□□□ -0.43
ABCA3-203ENST00000563623 DENND1BQ6P3S1 775 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 RELL1Q8IUW5 271 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF333Q96JL9 665 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 ANKRD27Q96NW4 1050 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 VPS11Q9H270 941 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 PRDM16Q9HAZ2 1276 aa12.34□□□□□ -0.43
ABCA3-203ENST00000563623 CYP4F11Q9HBI6 524 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms