RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 NETO1Q8TDF5 533 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 GAB3Q8WWW8 586 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 ATP2A3Q93084 1043 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 FNBP1Q96RU3 617 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 TTLL2Q9BWV7 592 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 BLZF1Q9H2G9 400 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 LINC00597Q9H2U6 94 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 MAGEF1Q9HAY2 307 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 ARHGAP26Q9UNA1 814 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 SLC8A2Q9UPR5 921 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 ACACBO00763 2458 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 GDF9O60383 454 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 GNL1P36915 607 aaPredicted RBP22.37■■□□□ 1.17
CHD9-208ENST00000563410 SNRPFP62306 86 aaKnown RBP22.37■■□□□ 1.17
CHD9-208ENST00000563410 FBXO43Q4G163 708 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 MDH1BQ5I0G3 518 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 CD101Q93033 1021 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 SNX21Q969T3 373 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 CCDC127Q96BQ5 260 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 TMEM30AQ9NV96 361 aa22.37■■□□□ 1.17
CHD9-208ENST00000563410 MYH10P35580 1976 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.36■■□□□ 1.17
CHD9-208ENST00000563410 SLC30A4O14863 429 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 RPP40O75818 363 aaKnown RBP22.36■■□□□ 1.17
CHD9-208ENST00000563410 FAM163BP0C2L3 166 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 CACNA2D1P54289 1103 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 BMT2Q1RMZ1 405 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 WDR72Q3MJ13 1102 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 FOXD4L6Q3SYB3 417 aaPredicted RBP22.36■■□□□ 1.17
CHD9-208ENST00000563410 FOXD4L3Q6VB84 417 aaPredicted RBP22.36■■□□□ 1.17
CHD9-208ENST00000563410 C12orf56Q8IXR9 622 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 CAMKK1Q8N5S9 505 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 C8orf48Q96LL4 319 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 SNX25Q9H3E2 840 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 DPEP3Q9H4B8 488 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 SLC39A2Q9NP94 309 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 TRPM5Q9NZQ8 1165 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 PCDHA7Q9UN72 937 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 ABCA7Q8IZY2 2146 aa22.36■■□□□ 1.17
CHD9-208ENST00000563410 EPG5Q9HCE0 2579 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 F8VP50 259 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 TRIM66O15016 1216 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 AXIN1O15169 862 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 STAU1O95793 577 aaKnown RBP22.35■■□□□ 1.17
CHD9-208ENST00000563410 PFKLP17858 780 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 PTPN1P18031 435 aaKnown RBP22.35■■□□□ 1.17
CHD9-208ENST00000563410 ANXA13P27216 316 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 RAP1GAPP47736 663 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 MYL6P60660 151 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 NOP14P78316 857 aaKnown RBP22.35■■□□□ 1.17
CHD9-208ENST00000563410 CUL4BQ13620 913 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 CACNA2D4Q7Z3S7 1137 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 KBTBD6Q86V97 674 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 OR6B3Q8NGW1 331 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 RPLP0P6Q8NHW5 317 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 PLEKHO2Q8TD55 490 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 HHIPQ96QV1 700 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 RNF38Q9H0F5 515 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 XYLT2Q9H1B5 865 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 NUP205Q92621 2012 aa22.35■■□□□ 1.17
CHD9-208ENST00000563410 MYO18AQ92614 2054 aaKnown RBP22.34■■□□□ 1.17
CHD9-208ENST00000563410 PVALEFA0A1B0GWK0 134 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 ZNF840PA6NDX5 716 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 LEFTY2O00292 366 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 F13A1P00488 732 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 ZSCAN22P10073 491 aaPredicted RBP22.34■■□□□ 1.17
CHD9-208ENST00000563410 RESP18Q5W5W9 173 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 SYT13Q7L8C5 426 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 HS2ST1Q7LGA3 356 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 EXOC4Q96A65 974 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 LOXL4Q96JB6 756 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 ARRDC1-AS1Q9H2J1 176 aa22.34■■□□□ 1.17
CHD9-208ENST00000563410 CGNQ9P2M7 1197 aaKnown RBP22.34■■□□□ 1.17
CHD9-208ENST00000563410 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.33■■□□□ 1.17
CHD9-208ENST00000563410 EPN2O95208 641 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 OLFM2O95897 454 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 CCDC192P0DO97 292 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 OPRD1P41143 372 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 AFMP43652 599 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 PDE6CP51160 858 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 TNNC1P63316 161 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 SLC7A9P82251 487 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 NR1H3Q13133 447 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 KNOP1Q1ED39 458 aaKnown RBP22.33■■□□□ 1.17
CHD9-208ENST00000563410 GAB4Q2WGN9 574 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 GRAMD1CQ8IYS0 662 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 ZNF518BQ9C0D4 1074 aa22.33■■□□□ 1.17
CHD9-208ENST00000563410 CACNA1BQ00975 2339 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 A8MXQ7 604 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 CLDN5O00501 218 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 AKAP3O75969 853 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 NFATC1O95644 943 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 OAS1P00973 400 aaKnown RBP22.32■■□□□ 1.16
CHD9-208ENST00000563410 ATICP31939 592 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 PPP3CCP48454 512 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 CASP4P49662 377 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 TRPC3Q13507 836 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 DMC1Q14565 340 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 CCDC6Q16204 474 aa22.32■■□□□ 1.16
CHD9-208ENST00000563410 B3GALNT2Q8NCR0 500 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms