RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 LMO3Q8TAP4 145 aa16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 CNOT6LQ96LI5 555 aaKnown RBP16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 LRRC3BQ96PB8 259 aa16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 SMOQ99835 787 aa16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 TTLL2Q9BWV7 592 aa16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 CISHQ9NSE2 258 aa16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 ATP8B3O60423 1300 aa16.33■□□□□ 0.2
CCNDBP1-203ENST00000562553 USP34Q70CQ2 3546 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 PMM2O15305 246 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 BEST1O76090 585 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 CCDC192P0DO97 292 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 IFRD2Q12894 506 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 CUL2Q13617 745 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 RBM43Q6ZSC3 357 aaKnown RBP16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 FLCNQ8NFG4 579 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 MRPS31Q92665 395 aaKnown RBP16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 CEP295NLQ96MC4 621 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 DMAP1Q9NPF5 467 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 ARHGEF3Q9NR81 526 aa16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCNDBP1-203ENST00000562553 CACNA1HO95180 2353 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 FGFR1OPO95684 399 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 AFPP02771 609 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 PSMC3P17980 439 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 DDX6P26196 483 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 GDI1P31150 447 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 RAD23BP54727 409 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 MON1AQ86VX9 555 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 MFSD6LQ8IWD5 586 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 CMTM8Q8IZV2 173 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 UBR7Q8N806 425 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 SLC4A11Q8NBS3 891 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 DEPDC1BQ8WUY9 529 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 KAT5Q92993 513 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 TRMT61BQ9BVS5 477 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 MFSD1Q9H3U5 465 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 CCL26Q9Y258 94 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
CCNDBP1-203ENST00000562553 C2orf78A6NCI8 922 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 TNFRSF10BO14763 440 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 P4HA2O15460 535 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 WEE1P30291 646 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 SLC5A3P53794 718 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 MAP3K7CLP57077 242 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 TAF10Q12962 218 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 PPP1R26Q5T8A7 1209 aaPredicted RBP16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 CLEC20AQ6ZU45 233 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 CREBRFQ8IUR6 639 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 NUP93Q8N1F7 819 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 TMEM105Q8N8V8 129 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 RIN3Q8TB24 985 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 NT5C1BQ96P26 610 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 PHOX2BQ99453 314 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 BRD9Q9H8M2 597 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 TBC1D17Q9HA65 648 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 CSNK1G1Q9HCP0 422 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 F5P12259 2224 aa16.3■□□□□ 0.2
CCNDBP1-203ENST00000562553 DPYSL4O14531 572 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 GALR2O43603 387 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 MBD3O95983 291 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 FAM200BP0CF97 657 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 ERCC5P28715 1186 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 AVPR1AP37288 418 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 CLCN5P51795 746 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 PFKPQ01813 784 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 FCHO2Q0JRZ9 810 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 MLF2Q15773 248 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 TPD52L1Q16890 204 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 SLC44A4Q53GD3 710 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 HSP90AA4PQ58FG1 418 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 ASTLQ6HA08 431 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 TTC39CQ8N584 583 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 JAKMIP2Q96AA8 810 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 E2F7Q96AV8 911 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 TMEM176AQ96HP8 235 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 HEXIM2Q96MH2 286 aaKnown RBP16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 INTS2Q9H0H0 1204 aaKnown RBP16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 OBP2AQ9NY56 170 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 GCNT4Q9P109 453 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 ZMYM5Q9UJ78 669 aa16.29■□□□□ 0.2
CCNDBP1-203ENST00000562553 ZNF840PA6NDX5 716 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 HHLA1C9JL84 531 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 ARNTLO00327 626 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 ZNF263O14978 683 aa16.28■□□□□ 0.2
CCNDBP1-203ENST00000562553 PI15O43692 258 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms