RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 SMYD5Q6GMV2 418 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 SH2D5Q6ZV89 423 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 POLNQ7Z5Q5 900 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 RHPN2Q8IUC4 686 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 ZFPM1Q8IX07 1006 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 SLC44A1Q8WWI5 657 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 MTBPQ96DY7 904 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 PRR11Q96HE9 360 aaPredicted RBP19.48■□□□□ 0.71
BBS4-204ENST00000562084 IQCGQ9H095 443 aaKnown RBP19.48■□□□□ 0.71
BBS4-204ENST00000562084 MKS1Q9NXB0 559 aa19.48■□□□□ 0.71
BBS4-204ENST00000562084 ATP9BO43861 1147 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 ZCCHC18P0CG32 403 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 TAL1P17542 331 aaPredicted RBP19.47■□□□□ 0.71
BBS4-204ENST00000562084 CDKN2BP42772 138 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 ZNF280AP59817 542 aaPredicted RBP19.47■□□□□ 0.71
BBS4-204ENST00000562084 WDR78Q5VTH9 848 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 C1orf146Q5VVC0 180 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 PDSS2Q86YH6 399 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 NIPA2Q8N8Q9 360 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 JADE3Q92613 823 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 TTC17Q96AE7 1141 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 FAM111AQ96PZ2 611 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 CNTN6Q9UQ52 1028 aa19.47■□□□□ 0.71
BBS4-204ENST00000562084 SCN4AP35499 1836 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 DDTLA6NHG4 134 aaPredicted RBP19.46■□□□□ 0.71
BBS4-204ENST00000562084 PI4K2BG5E9Z4 385 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 BUD23O43709 281 aaKnown RBP19.46■□□□□ 0.71
BBS4-204ENST00000562084 PLA2G6O60733 806 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 IFNB1P01574 187 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 INHBAP08476 426 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 ACO1P21399 889 aaKnown RBP19.46■□□□□ 0.71
BBS4-204ENST00000562084 STIP1P31948 543 aaKnown RBP19.46■□□□□ 0.71
BBS4-204ENST00000562084 ZNF200P98182 395 aaPredicted RBP19.46■□□□□ 0.71
BBS4-204ENST00000562084 PLCB3Q01970 1234 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 MED21Q13503 144 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 DBN1Q16643 649 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 FNBP1LQ5T0N5 605 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 LLGL2Q6P1M3 1020 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 TTC7BQ86TV6 843 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 OR6Y1Q8NGX8 325 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 FAM172AQ8WUF8 416 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 CHURC1Q8WUH1 139 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 POMGNT1Q8WZA1 660 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 NTPCRQ9BSD7 190 aaKnown RBP19.46■□□□□ 0.71
BBS4-204ENST00000562084 TMEM121Q9BTD3 319 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 PNPLA8Q9NP80 782 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 SLC7A8Q9UHI5 535 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 PCDHAC2Q9Y5I4 1007 aa19.46■□□□□ 0.71
BBS4-204ENST00000562084 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.46■□□□□ 0.71
BBS4-204ENST00000562084 GOLGA8RI6L899 631 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 AP1G1O43747 822 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 ENO1P06733 434 aaKnown RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 TBXAS1P24557 533 aaPredicted RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 GNA15P30679 374 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 SHROOM1Q2M3G4 852 aaPredicted RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 NAT14Q8WUY8 206 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 S100A14Q9HCY8 104 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 CHCHD3Q9NX63 227 aaKnown RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 PPARGC1AQ9UBK2 798 aaKnown RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 CIDEBQ9UHD4 219 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 FAM237BA0A1B0GVD1 139 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 A0A1B0GVG6 124 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 COPEO14579 308 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 DHX15O43143 795 aaKnown RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 LSM8O95777 96 aaKnown RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 SERPINA6P08185 405 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 MMP8P22894 467 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 ZACNQ401N2 412 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 LGSNQ5TDP6 509 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 TTC39BQ5VTQ0 682 aaPredicted RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 SAMD7Q7Z3H4 446 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 DHDDSQ86SQ9 333 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 ZNF526Q8TF50 670 aaPredicted RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 PI4K2AQ9BTU6 479 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 UBE2OQ9C0C9 1292 aaKnown RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 STN1Q9H668 368 aaKnown RBP19.45■□□□□ 0.7
BBS4-204ENST00000562084 TBC1D22BQ9NU19 505 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 ZNF180Q9UJW8 692 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 SERPINA10Q9UK55 444 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 GMEB1Q9Y692 573 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 IVNS1ABPQ9Y6Y0 642 aa19.45■□□□□ 0.7
BBS4-204ENST00000562084 COL2A1P02458 1487 aaPredicted RBP19.44■□□□□ 0.7
BBS4-204ENST00000562084 EGFRP00533 1210 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 UQCRBP14927 111 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 RANBP1P43487 201 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 NPTX2P47972 431 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 UBXN2AP68543 259 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 CUL2Q13617 745 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 PSMD6Q15008 389 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 MSS51Q4VC12 460 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 FAM102BQ5T8I3 360 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 ALYREFQ86V81 257 aaKnown RBP19.44■□□□□ 0.7
BBS4-204ENST00000562084 RASSF3Q86WH2 238 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 TREML1Q86YW5 311 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 SAMD3Q8N6K7 520 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 RSAD2Q8WXG1 361 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 SERAC1Q96JX3 654 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 THTPAQ9BU02 230 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 CCDC106Q9BWC9 280 aa19.44■□□□□ 0.7
BBS4-204ENST00000562084 FRMD8Q9BZ67 464 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms