RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 THG1LQ9NWX6 298 aaKnown RBP25.33■■□□□ 1.65
CDR2-202ENST00000561630 PPP1R3GB7ZBB8 358 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 ANGPT1Q15389 498 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 FAM35AQ86V20 835 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 FUKQ8N0W3 1084 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 FBXL13Q8NEE6 735 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 SEMA4DQ92854 862 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 ZFYVE19Q96K21 471 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 PHOX2BQ99453 314 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 TRPC7Q9HCX4 862 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 ARMCX3Q9UH62 379 aaPredicted RBP25.32■■□□□ 1.64
CDR2-202ENST00000561630 MYO15AQ9UKN7 3530 aa25.32■■□□□ 1.64
CDR2-202ENST00000561630 TRAV19A0A0A6YYK7 116 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 ORC1Q13415 861 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 FOXR2Q6PJQ5 311 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 ZNF687Q8N1G0 1237 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 CLDN23Q96B33 292 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 SMARCD1Q96GM5 515 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 MSANTD3Q96H12 275 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 FAXDC2Q96IV6 333 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 SLC22A12Q96S37 553 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 KCNK16Q96T55 309 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 MED10Q9BTT4 135 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 FAM86C1Q9NVL1 165 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 RAB20Q9NX57 234 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 TRPM5Q9NZQ8 1165 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 GCNT4Q9P109 453 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 F5P12259 2224 aa25.31■■□□□ 1.64
CDR2-202ENST00000561630 C2orf78A6NCI8 922 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 NCAM2O15394 837 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 USP17L7P0C7H9 530 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 MAGEA9P43362 315 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 PPP3CCP48454 512 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 FZD5Q13467 585 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 DCAF17Q5H9S7 520 aaPredicted RBP25.3■■□□□ 1.64
CDR2-202ENST00000561630 TCERG1LQ5VWI1 586 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 FAM3CQ92520 227 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 CEP63Q96MT8 703 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 CYP2S1Q96SQ9 504 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 C8orf33Q9H7E9 229 aaPredicted RBP25.3■■□□□ 1.64
CDR2-202ENST00000561630 DMAP1Q9NPF5 467 aaPredicted RBP25.3■■□□□ 1.64
CDR2-202ENST00000561630 DMDP11532 3685 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 VPS13AQ96RL7 3174 aa25.3■■□□□ 1.64
CDR2-202ENST00000561630 ZNF840PA6NDX5 716 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 BIN1O00499 593 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 CKMP06732 381 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 CCDC130P13994 396 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 PFKLP17858 780 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 TRIM21P19474 475 aaKnown RBP25.29■■□□□ 1.64
CDR2-202ENST00000561630 RPS9P46781 194 aaKnown RBP25.29■■□□□ 1.64
CDR2-202ENST00000561630 PDE6CP51160 858 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 KPNA1P52294 538 aaPredicted RBP25.29■■□□□ 1.64
CDR2-202ENST00000561630 CBWD6Q4V339 395 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 CBWD3Q5JTY5 395 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 CBWD5Q5RIA9 395 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 KLHL10Q6JEL2 608 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 TTI2Q6NXR4 508 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 C1orf228Q6PIY5 440 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 FILIP1Q7Z7B0 1213 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 C1orf210Q8IVY1 113 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 NUP93Q8N1F7 819 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 ARL14EPQ8N8R7 260 aaPredicted RBP25.29■■□□□ 1.64
CDR2-202ENST00000561630 C12orf29Q8N999 325 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 SLC2A14Q8TDB8 520 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 SLC35C1Q96A29 364 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 TWNKQ96RR1 684 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 DUSP9Q99956 384 aaKnown RBP25.29■■□□□ 1.64
CDR2-202ENST00000561630 FAM83CQ9BQN1 747 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 NT5C1AQ9BXI3 368 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 METTL14Q9HCE5 456 aaKnown RBP25.29■■□□□ 1.64
CDR2-202ENST00000561630 KRT82Q9NSB4 513 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 GTSE1Q9NYZ3 720 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 COQ4Q9Y3A0 265 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 NUP210Q8TEM1 1887 aaPredicted RBP25.29■■□□□ 1.64
CDR2-202ENST00000561630 COL4A2P08572 1712 aa25.29■■□□□ 1.64
CDR2-202ENST00000561630 ZFHX2Q9C0A1 2572 aaPredicted RBP25.28■■□□□ 1.64
CDR2-202ENST00000561630 CILPO75339 1184 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 AP1G2O75843 785 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 RTN3O95197 1032 aaPredicted RBP25.28■■□□□ 1.64
CDR2-202ENST00000561630 HDCP19113 662 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 CD58P19256 250 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 TNK2Q07912 1038 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 TAF10Q12962 218 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 FRMD5Q7Z6J6 570 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 RIN3Q8TB24 985 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 WHAMMQ8TF30 809 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 NELFBQ8WX92 580 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 SLITRK1Q96PX8 696 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 GKN1Q9NS71 199 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 NDRG2Q9UN36 371 aaKnown RBP25.28■■□□□ 1.64
CDR2-202ENST00000561630 USP34Q70CQ2 3546 aa25.28■■□□□ 1.64
CDR2-202ENST00000561630 PTPRDP23468 1912 aa25.27■■□□□ 1.64
CDR2-202ENST00000561630 BICDL2A1A5D9 508 aa25.27■■□□□ 1.64
CDR2-202ENST00000561630 TNFRSF10BO14763 440 aa25.27■■□□□ 1.64
CDR2-202ENST00000561630 YWHAQP27348 245 aa25.27■■□□□ 1.64
CDR2-202ENST00000561630 SOX9P48436 509 aa25.27■■□□□ 1.64
CDR2-202ENST00000561630 MRE11P49959 708 aa25.27■■□□□ 1.64
CDR2-202ENST00000561630 WDR44Q5JSH3 913 aa25.27■■□□□ 1.64
CDR2-202ENST00000561630 ALYREFQ86V81 257 aaKnown RBP25.27■■□□□ 1.64
CDR2-202ENST00000561630 RALGPS2Q86X27 583 aaPredicted RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms