RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	SRGAP2	O75044	1071 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	KIF4A	O95239	1232 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	TH	P07101	528 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	CD19	P15391	556 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	TAF6	P49848	677 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	NDST1	P52848	882 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	CKAP4	Q07065	602 aa	Known RBP	7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	PTP4A2	Q12974	167 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	ORC1	Q13415	861 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	ADAM15	Q13444	863 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	LIN9	Q5TKA1	542 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	DENND1B	Q6P3S1	775 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	ZNF572	Q7Z3I7	529 aa	Predicted RBP	7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	PEX26	Q7Z412	305 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	NT5DC3	Q86UY8	548 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	TMEM35B	Q8NCS4	154 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	C1orf131	Q8NDD1	294 aa	Known RBP	7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	GSTCD	Q8NEC7	633 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	ZNF564	Q8TBZ8	553 aa	Predicted RBP	7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	COG1	Q8WTW3	980 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	TOP1MT	Q969P6	601 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	PGBD4	Q96DM1	585 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	VCPIP1	Q96JH7	1222 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	RPGRIP1	Q96KN7	1286 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	GAD1	Q99259	594 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	ADAM2	Q99965	735 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	C11orf70	Q9BRQ4	267 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	NT5C1A	Q9BXI3	368 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	ZNF518B	Q9C0D4	1074 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	GOLPH3	Q9H4A6	298 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	RSAD1	Q9HA92	442 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	UBN1	Q9NPG3	1134 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	RGS18	Q9NS28	235 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	ADAM22	Q9P0K1	906 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	CNOT8	Q9UFF9	292 aa	Known RBP	7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	CEP83	Q9Y592	693 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	SNX9	Q9Y5X1	595 aa		7.96	□□□□□ -1.14
TPM1-231	ENST00000561395	CFAP47	Q6ZTR5	3102 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CTAGE15	A4D2H0	777 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	KPNA7	A9QM74	516 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395		O00370	1275 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	ZNF185	O15231	689 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	INPPL1	O15357	1258 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	MICAL2	O94851	1124 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CALB1	P05937	261 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	RB1	P06400	928 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	LINC00271	P0C7V0	271 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CTAGE8	P0CG41	777 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	VDR	P11473	427 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	MMP8	P22894	467 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	RRM1	P23921	792 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	SCNN1G	P51170	649 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	AFF1	P51825	1210 aa	Known RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	LILRA4	P59901	499 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	RPS6KA1	Q15418	735 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	STIL	Q15468	1287 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CNGA2	Q16280	664 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	SOWAHA	Q2M3V2	549 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	SGO2	Q562F6	1265 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	PLEKHG4	Q58EX7	1191 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	MMS22L	Q6ZRQ5	1243 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	RSRC2	Q7L4I2	434 aa	Known RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	DGLUCY	Q7Z3D6	616 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CTAGE6	Q86UF2	777 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	ZNF598	Q86UK7	904 aa	Known RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	UNC93A	Q86WB7	457 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	ECHDC2	Q86YB7	292 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CREG2	Q8IUH2	290 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CTAGE4	Q8IX94	777 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	PLPP6	Q8IY26	295 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	FIBCD1	Q8N539	461 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	WDTC1	Q8N5D0	677 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	KBTBD7	Q8WVZ9	684 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	LINC01599	Q8WXQ3	324 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	TSC1	Q92574	1164 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	GOLGA1	Q92805	767 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	RMDN1	Q96DB5	314 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	HES6	Q96HZ4	224 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CAPZA3	Q96KX2	299 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	RIPOR3	Q96MK2	946 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CNTNAP3B	Q96NU0	1288 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	PSMB7	Q99436	277 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	MRPL45	Q9BRJ2	306 aa	Known RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	PHF7	Q9BWX1	381 aa	Predicted RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CNTNAP3	Q9BZ76	1288 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	LHX5	Q9H2C1	402 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	MIOS	Q9NXC5	875 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CLEC1B	Q9P126	229 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	CHORDC1	Q9UHD1	332 aa	Predicted RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	AMFR	Q9UKV5	643 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	KIAA1257	Q9ULG3	409 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	L1RE1	Q9UN81	338 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	PACSIN2	Q9UNF0	486 aa	Predicted RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	USP15	Q9Y4E8	981 aa	Predicted RBP	7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	NME7	Q9Y5B8	376 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395	SCIN	Q9Y6U3	715 aa		7.95	□□□□□ -1.14
TPM1-231	ENST00000561395		V9GYY5	206 aa	Predicted RBP	7.95	□□□□□ -1.14

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