RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 C22orf31O95567 290 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
AP4E1-205ENST00000561393 ARHGAP1Q07960 439 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 ZNF844Q08AG5 666 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 RNF180Q86T96 592 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 SPATA2LQ8IUW3 424 aaPredicted RBP17.09■□□□□ 0.33
AP4E1-205ENST00000561393 LMO3Q8TAP4 145 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 MTG1Q9BT17 334 aaPredicted RBP17.09■□□□□ 0.33
AP4E1-205ENST00000561393 DDX23Q9BUQ8 820 aaKnown RBP17.09■□□□□ 0.33
AP4E1-205ENST00000561393 EPN3Q9H201 632 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 XPNPEP3Q9NQH7 507 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 SMYD2Q9NRG4 433 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 ADAMTS5Q9UNA0 930 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 CNGA2Q16280 664 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 PTPN20Q4JDL3 420 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 MDH1BQ5I0G3 518 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 TMEM63BQ5T3F8 832 aa17.09■□□□□ 0.33
AP4E1-205ENST00000561393 C18orf25Q96B23 403 aaPredicted RBP17.09■□□□□ 0.33
AP4E1-205ENST00000561393 ALG13Q9NP73 1137 aaKnown RBP17.09■□□□□ 0.33
AP4E1-205ENST00000561393 TMEM120BA0PK00 339 aa17.08■□□□□ 0.33
AP4E1-205ENST00000561393 KATNAL2Q8IYT4 538 aa17.08■□□□□ 0.33
AP4E1-205ENST00000561393 PLCD4Q9BRC7 762 aa17.08■□□□□ 0.33
AP4E1-205ENST00000561393 TRABDQ9H4I3 376 aa17.08■□□□□ 0.33
AP4E1-205ENST00000561393 PDZD7Q9H5P4 517 aa17.08■□□□□ 0.33
AP4E1-205ENST00000561393 DDIT4Q9NX09 232 aa17.08■□□□□ 0.33
AP4E1-205ENST00000561393 TREHO43280 583 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 FLT3P36888 993 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 SEPT6Q14141 434 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 GEN1Q17RS7 908 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 RAPH1Q70E73 1250 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 JOSD2Q8TAC2 188 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 FZD8Q9H461 694 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 PLEKHA5Q9HAU0 1116 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 TADA2AO75478 443 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 CFHP08603 1231 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 VCPP55072 806 aaKnown RBP17.08■□□□□ 0.32
AP4E1-205ENST00000561393 BST2Q10589 180 aaKnown RBP17.08■□□□□ 0.32
AP4E1-205ENST00000561393 RASGEF1CQ8N431 466 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 TFAP2BQ92481 460 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 RAPGEF5Q92565 580 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 DDX43Q9NXZ2 648 aaKnown RBP17.08■□□□□ 0.32
AP4E1-205ENST00000561393 C2CD2Q9Y426 696 aa17.08■□□□□ 0.32
AP4E1-205ENST00000561393 COPEO14579 308 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 NT5DC4Q86YG4 428 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 SCYL1Q96KG9 808 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 XPO6Q96QU8 1125 aaKnown RBP17.07■□□□□ 0.32
AP4E1-205ENST00000561393 TGS1Q96RS0 853 aaKnown RBP17.07■□□□□ 0.32
AP4E1-205ENST00000561393 SLC13A1Q9BZW2 595 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 SCN9AQ15858 1988 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 SIGLEC16A6NMB1 481 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 ZNF200P98182 395 aaPredicted RBP17.07■□□□□ 0.32
AP4E1-205ENST00000561393 NR1H3Q13133 447 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 C1orf220Q5T0J3 134 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 CCDC62Q6P9F0 684 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 PPIL6Q8IXY8 311 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 PAK5Q9P286 719 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 ZC3H7BQ9UGR2 993 aaKnown RBP17.07■□□□□ 0.32
AP4E1-205ENST00000561393 TCP11X1B4DZS4 312 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 UPP2O95045 317 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 ATG7O95352 703 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 SLC4A1P02730 911 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 ETS1P14921 441 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 COPS2P61201 443 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 ADIGQ0VDE8 80 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 GABPB2Q8TAK5 448 aaPredicted RBP17.07■□□□□ 0.32
AP4E1-205ENST00000561393 ZNF473Q8WTR7 871 aaKnown RBP17.07■□□□□ 0.32
AP4E1-205ENST00000561393 CYTH2Q99418 400 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 KRT82Q9NSB4 513 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 PTPRJQ12913 1337 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 MYH15Q9Y2K3 1946 aa17.07■□□□□ 0.32
AP4E1-205ENST00000561393 CCDC78A2IDD5 438 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 EEF2KO00418 725 aaKnown RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 GARSP41250 739 aaKnown RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 LRRC31Q6UY01 552 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 KDM7AQ6ZMT4 941 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 PWWP2AQ96N64 755 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 CPXM1Q96SM3 734 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 EPAS1Q99814 870 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 GGT7Q9UJ14 662 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 AP4E1Q9UPM8 1137 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 FNDC3AQ9Y2H6 1198 aaKnown RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 KRT38O76015 456 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 STIP1P31948 543 aaKnown RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 SLC10A6Q3KNW5 377 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 TTMPQ5BVD1 217 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 DUPD1Q68J44 220 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 TBC1D31Q96DN5 1066 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 ROPN1BQ9BZX4 212 aaPredicted RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 ROPN1Q9HAT0 212 aaPredicted RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 ABI2Q9NYB9 513 aaPredicted RBP17.06■□□□□ 0.32
AP4E1-205ENST00000561393 TUBGCP4Q9UGJ1 667 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 PCYOX1Q9UHG3 505 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 FSCN2O14926 492 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 ATP9BO43861 1147 aa17.06■□□□□ 0.32
AP4E1-205ENST00000561393 TSPAN1O60635 241 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms