RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CD72P21854 359 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 TAF10Q12962 218 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 STX1AQ16623 288 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 ARHGAP44Q17R89 818 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 VITQ6UXI7 678 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 ARHGEF19Q8IW93 802 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 NUP93Q8N1F7 819 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 EHBP1Q8NDI1 1231 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 SCAMP5Q8TAC9 235 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 KAT5Q92993 513 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 FBXO32Q969P5 355 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 ELSPBP1Q96BH3 223 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 TMEM176AQ96HP8 235 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 ZFYVE19Q96K21 471 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 C8orf48Q96LL4 319 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 SLITRK1Q96PX8 696 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 MED15Q96RN5 788 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 NACA2Q9H009 215 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 IL21Q9HBE4 155 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 UBE2TQ9NPD8 197 aaPredicted RBP10.73□□□□□ -0.69
HERC1-212ENST00000561348 SAMSN1Q9NSI8 373 aaKnown RBP10.73□□□□□ -0.69
HERC1-212ENST00000561348 TMEM30AQ9NV96 361 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 EHD2Q9NZN4 543 aa10.73□□□□□ -0.69
HERC1-212ENST00000561348 TRAV19A0A0A6YYK7 116 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 C2orf78A6NCI8 922 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 KCNJ18B7U540 433 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 SCAMP3O14828 347 aaKnown RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 ECI2O75521 394 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 MICAL2O94851 1124 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 PRAMEF12O95522 483 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 F11P03951 625 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 PSMC3P17980 439 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 HDCP19113 662 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 COL9A1P20849 921 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 TBXAS1P24557 533 aaPredicted RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 YWHAQP27348 245 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 ERCC5P28715 1186 aaPredicted RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 KPNA1P52294 538 aaPredicted RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 NUBP1P53384 320 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 RAD23BP54727 409 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 INCA1Q0VD86 236 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 KCNJ12Q14500 433 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 GOLGA7BQ2TAP0 167 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 IER5LQ5T953 404 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 CC2D1AQ6P1N0 951 aaPredicted RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 GJB7Q6PEY0 223 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 C11orf57Q6ZUT1 292 aaPredicted RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 PAQR9Q6ZVX9 377 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 CMTM8Q8IZV2 173 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 CRYBG2Q8N1P7 616 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 FBXL6Q8N531 539 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
HERC1-212ENST00000561348 SLC4A11Q8NBS3 891 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 CSGALNACT1Q8TDX6 532 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 WHAMMQ8TF30 809 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 SPATA17Q96L03 361 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 SMOQ99835 787 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 THAP9Q9H5L6 903 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 ARHGEF3Q9NR81 526 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 HEBP1Q9NRV9 189 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 ANO10Q9NW15 660 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 TAB2Q9NYJ8 693 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 TMEM63CQ9P1W3 806 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 COQ4Q9Y3A0 265 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 NFE2L3Q9Y4A8 694 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 TECTAO75443 2155 aa10.72□□□□□ -0.69
HERC1-212ENST00000561348 PIK3R2O00459 728 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 RTN3O95197 1032 aaPredicted RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 TPM2P07951 284 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 USP17L7P0C7H9 530 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 MBL2P11226 248 aaPredicted RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 SLC9A1P19634 815 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 CDK11BP21127 795 aaKnown RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 ACO1P21399 889 aaKnown RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 FCARP24071 287 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 SLC5A3P53794 718 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 SLC8A3P57103 927 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 PFKPQ01813 784 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 APBA1Q02410 837 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 UBXN2BQ14CS0 331 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 SLC44A4Q53GD3 710 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 SGO2Q562F6 1265 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 FOXR2Q6PJQ5 311 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 TPRG1Q6ZUI0 275 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 TMEM150AQ86TG1 271 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 MON1AQ86VX9 555 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 TTC39CQ8N584 583 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 UBA3Q8TBC4 463 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 RSPRY1Q96DX4 576 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 ASIC4Q96FT7 647 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 TRMT2BQ96GJ1 504 aaKnown RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 PCMTD1Q96MG8 357 aaPredicted RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 SLC22A12Q96S37 553 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 HNRNPABQ99729 332 aaKnown RBP10.71□□□□□ -0.69
HERC1-212ENST00000561348 TUBGCP2Q9BSJ2 902 aa10.71□□□□□ -0.69
HERC1-212ENST00000561348 VPS16Q9H269 839 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms