RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 KINO60870 393 aaKnown RBP17.01■□□□□ 0.31
LMX1B-204ENST00000561065 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
LMX1B-204ENST00000561065 HOXC13P31276 330 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 GRIK1P39086 918 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 SATB1Q01826 763 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 CCINQ13939 588 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 ZNF268Q14587 947 aaPredicted RBP17.01■□□□□ 0.31
LMX1B-204ENST00000561065 PON2Q15165 354 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 MAPRE1Q15691 268 aaKnown RBP17.01■□□□□ 0.31
LMX1B-204ENST00000561065 ZACNQ401N2 412 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 NAIF1Q69YI7 327 aaPredicted RBP17.01■□□□□ 0.31
LMX1B-204ENST00000561065 ELOA2Q8IYF1 753 aaPredicted RBP17.01■□□□□ 0.31
LMX1B-204ENST00000561065 B3GALNT2Q8NCR0 500 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 CYP2S1Q96SQ9 504 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 TTLL2Q9BWV7 592 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 B3GNT5Q9BYG0 378 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 SEMA4AQ9H3S1 761 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 EBF3Q9H4W6 596 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 GKN1Q9NS71 199 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 HMGXB4Q9UGU5 601 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 ATG2BQ96BY7 2078 aa17.01■□□□□ 0.31
LMX1B-204ENST00000561065 SOBPA7XYQ1 873 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 A8MXQ7 604 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 LILRB5O75023 590 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 PHACTR2O75167 634 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 FAM163BP0C2L3 166 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 ZXDBP98169 803 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 STIM1Q13586 685 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 MTF1Q14872 753 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 ITPRIPL2Q3MIP1 535 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 ZCWPW2Q504Y3 356 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 SPOPLQ6IQ16 392 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 DENND5BQ6ZUT9 1274 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 SMYD4Q8IYR2 804 aaPredicted RBP17■□□□□ 0.31
LMX1B-204ENST00000561065 FMR1NBQ8N0W7 255 aaPredicted RBP17■□□□□ 0.31
LMX1B-204ENST00000561065 GUF1Q8N442 669 aaKnown RBP17■□□□□ 0.31
LMX1B-204ENST00000561065 ARL14EPQ8N8R7 260 aaPredicted RBP17■□□□□ 0.31
LMX1B-204ENST00000561065 IER2Q9BTL4 223 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 ZSCAN32Q9NX65 697 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 PCDHGA2Q9Y5H1 932 aa17■□□□□ 0.31
LMX1B-204ENST00000561065 TRAV19A0A0A6YYK7 116 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 TRIM66O15016 1216 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 AKAP3O75969 853 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 CKMP06732 381 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 TRIM49P0CI25 452 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 TRIM49CP0CI26 452 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 NR2F2P24468 414 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 PPP1R2P41236 205 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 RUNX3Q13761 415 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 NFIL3Q16649 462 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 ZNF667Q5HYK9 610 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 MAMSTRQ6ZN01 415 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 PAQR9Q6ZVX9 377 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 SV2AQ7L0J3 742 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 TMC2Q8TDI7 906 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 SMARCE1Q969G3 411 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 C8orf48Q96LL4 319 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 ELOVL4Q9GZR5 314 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 THG1LQ9NWX6 298 aaKnown RBP16.99■□□□□ 0.31
LMX1B-204ENST00000561065 EML5Q05BV3 1969 aa16.99■□□□□ 0.31
LMX1B-204ENST00000561065 MAPK13O15264 365 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 ASS1P00966 412 aaKnown RBP16.98■□□□□ 0.31
LMX1B-204ENST00000561065 USP17L7P0C7H9 530 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 TRIM21P19474 475 aaKnown RBP16.98■□□□□ 0.31
LMX1B-204ENST00000561065 ASPAP45381 313 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 NOP14P78316 857 aaKnown RBP16.98■□□□□ 0.31
LMX1B-204ENST00000561065 DMWDQ09019 674 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 ORC1Q13415 861 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 LRRC32Q14392 662 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 FAM35AQ86V20 835 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 DCLK2Q8N568 766 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 CEP295NLQ96MC4 621 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 TSG101Q99816 390 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 DNAI2Q9GZS0 605 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 WNT6Q9Y6F9 365 aa16.98■□□□□ 0.31
LMX1B-204ENST00000561065 ZNF840PA6NDX5 716 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 K7ESF4 209 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 IKBKBO14920 756 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 OLFM2O95897 454 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 HLA-DRAP01903 254 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 KRT13P13646 458 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 P4HA1P13674 534 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 ANXA13P27216 316 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 CCR3P51677 355 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 PPP3CAQ08209 521 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 PNOCQ13519 176 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 SPEM1Q8N4L4 309 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 TTC16Q8NEE8 873 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 SH3RF2Q8TEC5 729 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 KCNK16Q96T55 309 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 EPC1Q9H2F5 836 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 APOBEC3GQ9HC16 384 aaKnown RBP16.97■□□□□ 0.31
LMX1B-204ENST00000561065 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.31
LMX1B-204ENST00000561065 ARHGAP26Q9UNA1 814 aa16.97■□□□□ 0.31
LMX1B-204ENST00000561065 CLSTN1O94985 981 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms