RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CRABP2P29373 138 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 PIK3CAP42336 1068 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 IREB2P48200 963 aaKnown RBP14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 SULT2A1Q06520 285 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 CAPSQ13938 189 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 KRT72Q14CN4 511 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 SIX1Q15475 284 aaPredicted RBP14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 ZBTB41Q5SVQ8 909 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 KLC3Q6P597 504 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 TRABD2AQ86V40 505 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 TRIM42Q8IWZ5 723 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 CYP4X1Q8N118 509 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 LRRC43Q8N309 656 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 PIP4K2CQ8TBX8 421 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 GRK7Q8WTQ7 553 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 OTUD5Q96G74 571 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 BTBD6Q96KE9 485 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 MSTO1Q9BUK6 570 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 TRAIPQ9BWF2 469 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 PLVAPQ9BX97 442 aa14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.63□□□□□ -0.07
RABGGTA-220ENST00000560998 ADGRA2Q96PE1 1338 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 TP73O15350 636 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ADCY3O60266 1144 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 PFDN1O60925 122 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 MAFO75444 373 aaPredicted RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 LDHAP00338 332 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 UNGP13051 313 aaPredicted RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 TCF7P36402 384 aaPredicted RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 RAP1GDS1P52306 607 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 RPL26P61254 145 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 USP46P62068 366 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 KRT17Q04695 432 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 DEUP1Q05D60 604 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 METTL7BQ6UX53 244 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ACAD11Q709F0 780 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 PHLDB2Q86SQ0 1253 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 CPNE8Q86YQ8 564 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 RNF168Q8IYW5 571 aaPredicted RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ZDHHC14Q8IZN3 488 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 SEPT1Q8WYJ6 367 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 MAML1Q92585 1016 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 NSL1Q96IY1 281 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 CGRRF1Q99675 332 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 R3HDMLQ9H3Y0 253 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 PTTG2Q9NZH5 202 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ANKFY1Q9P2R3 1169 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 PTPN22Q9Y2R2 807 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 SOCS7O14512 581 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ITGA2BP08514 1039 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ACO1P21399 889 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 CHKAP35790 457 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 RGS2P41220 211 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 LY6KQ17RY6 165 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 FAM91A1Q658Y4 838 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 SPATA24Q86W54 205 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ZNF677Q86XU0 584 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 KBTBD2Q8IY47 623 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 VPS52Q8N1B4 723 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 CLMNQ96JQ2 1002 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 CATSPER2Q96P56 530 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 TUBGCP5Q96RT8 1024 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ECSITQ9BQ95 431 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 SSU72Q9NP77 194 aaKnown RBP14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 ASIC3Q9UHC3 531 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 SSX2IPQ9Y2D8 614 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 PCDHB2Q9Y5E7 798 aa14.62□□□□□ -0.07
RABGGTA-220ENST00000560998 CNTNAP2Q9UHC6 1331 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 CXCL11O14625 94 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 SPOPO43791 374 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 MAGEC1O60732 1142 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 ATP6V1G1O75348 118 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 PYGMP11217 842 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 VAV1P15498 845 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 BPIFB4P59827 614 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 HNRNPDQ14103 355 aaKnown RBP14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 TMEM63BQ5T3F8 832 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 SPOPLQ6IQ16 392 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 EEPD1Q7L9B9 569 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 ERO1BQ86YB8 467 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 ALDH16A1Q8IZ83 802 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 APOBEC3GQ9HC16 384 aaKnown RBP14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 ZDHHC7Q9NXF8 308 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 PPME1Q9Y570 386 aa14.61□□□□□ -0.07
RABGGTA-220ENST00000560998 ARIH2O95376 493 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 SLC25A27O95847 323 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 CETPP11597 493 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 INHBCP55103 352 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 CUL2Q13617 745 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 TMED2Q15363 201 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 C6orf163Q5TEZ5 329 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 OTOAQ7RTW8 1153 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 MTDHQ86UE4 582 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 MCOLN2Q8IZK6 566 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 PRPF31Q8WWY3 499 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 DDX27Q96GQ7 796 aaKnown RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 FAM167AQ96KS9 214 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 SMC6Q96SB8 1091 aa14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 AVENQ9NQS1 362 aaPredicted RBP14.6□□□□□ -0.07
RABGGTA-220ENST00000560998 AGTPBP1Q9UPW5 1226 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms