RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ASCC3Q8N3C0 2202 aaKnown RBP19.86■□□□□ 0.77
TPM1-226ENST00000560959 LEFTY2O00292 366 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 ITGB3P05106 788 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 CHRM1P11229 460 aaPredicted RBP19.86■□□□□ 0.77
TPM1-226ENST00000560959 HNRNPLP14866 589 aaKnown RBP eCLIP19.86■□□□□ 0.774e-7■■□□□ 13.3
TPM1-226ENST00000560959 PTGER3P43115 390 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 TNFRSF4P43489 277 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 SLC7A9P82251 487 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 ZXDBP98169 803 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 DHX8Q14562 1220 aaKnown RBP19.86■□□□□ 0.77
TPM1-226ENST00000560959 MCM6Q14566 821 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 MAP7D1Q3KQU3 841 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 C4orf50Q6ZRC1 276 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 TXNDC5Q8NBS9 432 aaKnown RBP19.86■□□□□ 0.77
TPM1-226ENST00000560959 RLN3Q8WXF3 142 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 RAD54LQ92698 747 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 PNKPQ96T60 521 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 TRPM5Q9NZQ8 1165 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 ITGA11Q9UKX5 1188 aa19.86■□□□□ 0.77
TPM1-226ENST00000560959 DSPP15924 2871 aaKnown RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 LDHAP00338 332 aaKnown RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 ACAT1P24752 427 aaKnown RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 DDIT3P35638 169 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 SIM1P81133 766 aaPredicted RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 TFAMQ00059 246 aaKnown RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 DUOXA1Q1HG43 343 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 LYSMD4Q5XG99 296 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 MCTP1Q6DN14 999 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 KIAA1211LQ6NV74 962 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 RABEPKQ7Z6M1 372 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 SCN4BQ8IWT1 228 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 TMEFF1Q8IYR6 380 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 ALLCQ8N6M5 410 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 KRI1Q8N9T8 703 aaKnown RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 KCNV2Q8TDN2 545 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 TTLL2Q9BWV7 592 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 STRA6Q9BX79 667 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 MAGEC2Q9UBF1 373 aaPredicted RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 MBD1Q9UIS9 605 aaPredicted RBP19.85■□□□□ 0.77
TPM1-226ENST00000560959 KLK13Q9UKR3 277 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 SLC6A14Q9UN76 642 aa19.85■□□□□ 0.77
TPM1-226ENST00000560959 MYO16Q9Y6X6 1858 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 SGK1O00141 431 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 TAF4O00268 1085 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 PPP1R37O75864 691 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 KAT7O95251 611 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 KLF8O95600 359 aaPredicted RBP19.84■□□□□ 0.77
TPM1-226ENST00000560959 CAPNS1P04632 268 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 APODP05090 189 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 CYP17A1P05093 508 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 GRIA2P42262 883 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 KIR2DL1P43626 348 aaPredicted RBP19.84■□□□□ 0.77
TPM1-226ENST00000560959 MAPK8P45983 427 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 RBP5P82980 135 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 DHCR24Q15392 516 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 MAPRE1Q15691 268 aaKnown RBP19.84■□□□□ 0.77
TPM1-226ENST00000560959 ZNF423Q2M1K9 1284 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 LIMS2Q7Z4I7 341 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 OSTM1Q86WC4 334 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 BRSK2Q8IWQ3 736 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 ADGRF2Q8IZF7 708 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 HDDC3Q8N4P3 179 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 CSGALNACT2Q8N6G5 542 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 SEL1LQ9UBV2 794 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 EXOC7Q9UPT5 735 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
TPM1-226ENST00000560959 ANKRD11Q6UB99 2663 aaPredicted RBP19.83■□□□□ 0.77
TPM1-226ENST00000560959 ANTXRLA6NF34 631 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.83■□□□□ 0.77
TPM1-226ENST00000560959 AP5Z1O43299 807 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 OLFM2O95897 454 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 SERPINF2P08697 491 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 PLCG1P19174 1290 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 TIE1P35590 1138 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 LONP1P36776 959 aaKnown RBP19.83■□□□□ 0.77
TPM1-226ENST00000560959 ATXN3P54252 364 aaPredicted RBP19.83■□□□□ 0.77
TPM1-226ENST00000560959 GFPT1Q06210 699 aaPredicted RBP19.83■□□□□ 0.77
TPM1-226ENST00000560959 SOWAHAQ2M3V2 549 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 DENND5BQ6ZUT9 1274 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 FILIP1Q7Z7B0 1213 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 TTC30AQ86WT1 665 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 LARP4BQ92615 738 aaKnown RBP19.83■□□□□ 0.77
TPM1-226ENST00000560959 FAM213AQ9BRX8 229 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 BCCIPQ9P287 314 aaKnown RBP eCLIP19.83■□□□□ 0.77
TPM1-226ENST00000560959 CDH9Q9ULB4 789 aa19.83■□□□□ 0.77
TPM1-226ENST00000560959 FREM2Q5SZK8 3169 aa19.83■□□□□ 0.76
TPM1-226ENST00000560959 TCHHQ07283 1943 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 LAMA5O15230 3695 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 SPAARA0A1B0GVQ0 90 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 ZNF840PA6NDX5 716 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 GARTP22102 1010 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 SLC6A11P48066 632 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 WNT7BP56706 349 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 NOP14P78316 857 aaKnown RBP19.82■□□□□ 0.76
TPM1-226ENST00000560959 PREPLQ4J6C6 727 aaPredicted RBP19.82■□□□□ 0.76
TPM1-226ENST00000560959 RHBDF2Q6PJF5 856 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 SLC36A4Q6YBV0 504 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 PROSER1Q86XN7 944 aa19.82■□□□□ 0.76
TPM1-226ENST00000560959 DDX42Q86XP3 938 aaKnown RBP eCLIP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms