RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 GBP1P32455 592 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 MSH2P43246 934 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 PSMC6P62333 389 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 PCDH1Q08174 1060 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 SLC39A14Q15043 492 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 TMEM266Q2M3C6 531 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 FAM153CQ494X1 144 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 GNASQ5JWF2 1037 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 SH2D4BQ5SQS7 431 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 NT5DC1Q5TFE4 455 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 ALKBH5Q6P6C2 394 aaKnown RBP7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 SHC4Q6S5L8 630 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 CEP128Q6ZU80 1094 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 NCCRP1Q6ZVX7 275 aaPredicted RBP7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 PIGWQ7Z7B1 504 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 EXOC3L1Q86VI1 746 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 KRT78Q8N1N4 520 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 ARHGAP18Q8N392 663 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 IPMKQ8NFU5 416 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 BAHD1Q8TBE0 780 aaPredicted RBP7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 WHAMMQ8TF30 809 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 TRAPPC12Q8WVT3 735 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 ELF4Q99607 663 aaPredicted RBP7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 PAIP1Q9H074 479 aaKnown RBP7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 MLXIPQ9HAP2 919 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 RHBDL2Q9NX52 303 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 AKAP7Q9P0M2 348 aaPredicted RBP7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 FAM153AQ9UHL3 310 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 SCOCQ9UIL1 159 aa7.1□□□□□ -1.27
TSPAN3-209ENST00000560715 ROBO1Q9Y6N7 1651 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 H7C0S8 307 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 STAM2O75886 525 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 HSPA9P38646 679 aaKnown RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 PLCD1P51178 756 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 SH3BGRP55822 239 aaPredicted RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 HERVK_113P62684 666 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 PKN1Q16512 942 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 FYB2Q5VWT5 728 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 RESP18Q5W5W9 173 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ZNF365Q70YC5 407 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 COPS6Q7L5N1 327 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 NUP54Q7Z3B4 507 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 TMEM110Q86TL2 294 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 TRIML1Q8N9V2 468 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ATP11CQ8NB49 1132 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ANKK1Q8NFD2 765 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ACAT2Q9BWD1 397 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 BHLHE41Q9C0J9 482 aaPredicted RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ARHGEF3Q9NR81 526 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 FEM1BQ9UK73 627 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 BACE2Q9Y5Z0 518 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 COL15A1P39059 1388 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ABCC12Q96J65 1359 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 NEURL1BA8MQ27 555 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 B4E1Z4 1266 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 MEIS1O00470 390 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 NPC1O15118 1278 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 IRAK2O43187 625 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 PPP6R2O75170 966 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 IGKV5-2P06315 115 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 KRT16P08779 473 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 MYL6BP14649 208 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ALOX15P16050 662 aaPredicted RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 AGXTP21549 392 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 TLX1P31314 330 aaPredicted RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 CARSP49589 748 aaKnown RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 PEX5P50542 639 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 CCR5P51681 352 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 CCR9P51686 369 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 MRPS25P82663 173 aaKnown RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 IL1RL1Q01638 556 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 NKG7Q16617 165 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ZACNQ401N2 412 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 METTL24Q5JXM2 366 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 NUP188Q5SRE5 1749 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 GJC2Q5T442 439 aaPredicted RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 CPZQ66K79 652 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 C8orf74Q6P047 294 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 OLFML1Q6UWY5 402 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 DENND5BQ6ZUT9 1274 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 TRIM59Q8IWR1 403 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ZZZ3Q8IYH5 903 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 PCDH19Q8TAB3 1148 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 FAM136AQ96C01 138 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 C1GALT1C1Q96EU7 318 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 NACA2Q9H009 215 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ECT2Q9H8V3 914 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ZNHIT6Q9NWK9 470 aaKnown RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 CNOT8Q9UFF9 292 aaKnown RBP7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 HCN2Q9UL51 889 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 NFU1Q9UMS0 254 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 ATP23Q9Y6H3 246 aa7.09□□□□□ -1.27
TSPAN3-209ENST00000560715 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 A0A087X0M5 115 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 A0A0D9SFI3 127 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 A0A1B0GX30 115 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 A0A1W2PNR3 127 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 ARNTLO00327 626 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 B3GALT4O96024 378 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CALB2P22676 271 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms