RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 SF3B3Q15393 1217 aaKnown RBP4.56□□□□□ -1.68
USP8-211ENST00000560527 C10orf62Q5T681 223 aaPredicted RBP4.56□□□□□ -1.68
USP8-211ENST00000560527 KIAA0895LQ68EN5 471 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 SYTL1Q8IYJ3 562 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 SPARTQ8N0X7 666 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 ZDHHC12Q96GR4 267 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 SNX27Q96L92 541 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 FAM227BQ96M60 508 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 MLST8Q9BVC4 326 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 TTLL2Q9BWV7 592 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 ACTRT3Q9BYD9 372 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 WDR11Q9BZH6 1224 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 TPSD1Q9BZJ3 242 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 ZBTB26Q9HCK0 441 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 TBC1D23Q9NUY8 699 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 ANKFY1Q9P2R3 1169 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 TESQ9UGI8 421 aaKnown RBP4.56□□□□□ -1.68
USP8-211ENST00000560527 SH2B3Q9UQQ2 575 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 MAN2B2Q9Y2E5 1009 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 MRPS17Q9Y2R5 130 aaKnown RBP4.56□□□□□ -1.68
USP8-211ENST00000560527 PCDHGB2Q9Y5G2 931 aa4.56□□□□□ -1.68
USP8-211ENST00000560527 COL4A3Q01955 1670 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 A0A087WV62 115 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 A0A087WZ62 844 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 WDR27A2RRH5 827 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 PLEKHD1A6NEE1 506 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 GOLGA6L3A6NEY3 463 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 YY2O15391 372 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 SLC16A3O15427 465 aaKnown RBP4.55□□□□□ -1.68
USP8-211ENST00000560527 MPPED1O15442 326 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 PIAS2O75928 621 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 HKR1P10072 659 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 GABRB3P28472 473 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 EPHA3P29320 983 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 PRKAR1BP31321 381 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 SLC5A2P31639 672 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 MCM7P33993 719 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 FOLR3P41439 243 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 MAPK10P53779 464 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 ATXN1P54253 815 aaKnown RBP4.55□□□□□ -1.68
USP8-211ENST00000560527 TIAL1Q01085 375 aaKnown RBP eCLIP4.55□□□□□ -1.68
USP8-211ENST00000560527 CHAF1AQ13111 956 aaPredicted RBP4.55□□□□□ -1.68
USP8-211ENST00000560527 CACHD1Q5VU97 1274 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 ARL6IP4Q66PJ3 421 aaKnown RBP4.55□□□□□ -1.68
USP8-211ENST00000560527 PGBD2Q6P3X8 592 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 CRIP3Q6Q6R5 217 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 KIAA0408Q6ZU52 694 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 SMC5Q8IY18 1101 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 MYCBPAPQ8TBZ2 947 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 LPIN2Q92539 896 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 RSPRY1Q96DX4 576 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 LRRC46Q96FV0 321 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 ARPC5LQ9BPX5 153 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 AIFM2Q9BRQ8 373 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 MMRN2Q9H8L6 949 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 TMEM8AQ9HCN3 771 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 CASS4Q9NQ75 786 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 KLC4Q9NSK0 619 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 SYBUQ9NX95 663 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 SERTAD3Q9UJW9 196 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 TBC1D30Q9Y2I9 924 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 FER1L4A9Z1Z3 1794 aa4.55□□□□□ -1.68
USP8-211ENST00000560527 F5H423 210 aaPredicted RBP4.54□□□□□ -1.68
USP8-211ENST00000560527 MATN3O15232 486 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 FFAR2O15552 330 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 RGS10O43665 173 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 SRGAP2O75044 1071 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ZNF202O95125 648 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 RASAL1O95294 804 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ONECUT2O95948 504 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 FSHBP01225 129 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ADH4P08319 380 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 HNRNPMP52272 730 aaKnown RBP eCLIP4.54□□□□□ -1.68
USP8-211ENST00000560527 HMGA2P52926 109 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 STARD3Q14849 445 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 PRR16Q569H4 304 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 FAM83BQ5T0W9 1011 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ZNF618Q5T7W0 954 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 MANEALQ5VSG8 457 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 RRAGBQ5VZM2 374 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 MRNIPQ6NTE8 343 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 FBXO38Q6PIJ6 1188 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 KCTD20Q7Z5Y7 419 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ULK2Q8IYT8 1036 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ABRAQ8N0Z2 381 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 LCORLQ8N3X6 602 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 DNAJB14Q8TBM8 379 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 OSCP1Q8WVF1 389 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 POF1BQ8WVV4 589 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ATRIPQ8WXE1 791 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ATG4AQ8WYN0 398 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 SLC9A6Q92581 669 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 FKBP10Q96AY3 582 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 Q96MF0 132 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 PRRX2Q99811 253 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 CRB3Q9BUF7 120 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 ZNF341Q9BYN7 854 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 TRIM36Q9NQ86 728 aa4.54□□□□□ -1.68
USP8-211ENST00000560527 GJB4Q9NTQ9 266 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms