RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 FAM3CQ92520 227 aa16.17■□□□□ 0.18
SNRPA1-210ENST00000560383 SPATA17Q96L03 361 aa16.17■□□□□ 0.18
SNRPA1-210ENST00000560383 GCNAQ96QF7 691 aa16.17■□□□□ 0.18
SNRPA1-210ENST00000560383 DPEP3Q9H4B8 488 aa16.17■□□□□ 0.18
SNRPA1-210ENST00000560383 SLC38A8A6NNN8 435 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 BDNFP23560 247 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 MDH1BQ5I0G3 518 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 GPR158Q5T848 1215 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 SDHAF4Q5VUM1 108 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 SPOPLQ6IQ16 392 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 UNC93AQ86WB7 457 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 TRIML1Q8N9V2 468 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 SUMF1Q8NBK3 374 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 CSGALNACT1Q8TDX6 532 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 RUBCNQ92622 972 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 ELMO3Q96BJ8 720 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 RSPRY1Q96DX4 576 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 FAXDC2Q96IV6 333 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 TNIP3Q96KP6 325 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 C8orf48Q96LL4 319 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 IMPG2Q9BZV3 1241 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 C8orf33Q9H7E9 229 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 APOBEC3GQ9HC16 384 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 ZSCAN32Q9NX65 697 aa16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 UXTQ9UBK9 157 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 NDRG2Q9UN36 371 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-210ENST00000560383 STX10O60499 249 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 LILRB5O75023 590 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 DDX6P26196 483 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 RAP1GAPP47736 663 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 MXI1P50539 228 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 NOP14P78316 857 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 PLCB2Q00722 1185 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 CSTF1Q05048 431 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 MTAPQ13126 283 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 PPP2R5DQ14738 602 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 ISM2Q6H9L7 571 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 TTI2Q6NXR4 508 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 SCN4BQ8IWT1 228 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 CRYBG2Q8N1P7 616 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 CEP63Q96MT8 703 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 DUSP9Q99956 384 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 TTLL2Q9BWV7 592 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 SLC46A2Q9BY10 475 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 B3GNT5Q9BYG0 378 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 ELOVL4Q9GZR5 314 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 EPC1Q9H2F5 836 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 CYP3A43Q9HB55 503 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 KIAA1468Q9P260 1216 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 COQ4Q9Y3A0 265 aa16.15■□□□□ 0.18
SNRPA1-210ENST00000560383 CACNA1AO00555 2505 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 DPYSL4O14531 572 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 TRIM66O15016 1216 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 TADA3O75528 432 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 CHRNB1P11230 501 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 GRIK1P39086 918 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 CCR3P51677 355 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 CYP4F8P98187 520 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 SCARA5Q6ZMJ2 495 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 DENND5BQ6ZUT9 1274 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 PAQR9Q6ZVX9 377 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 ERMP1Q7Z2K6 904 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 FILIP1Q7Z7B0 1213 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 RALGPS2Q86X27 583 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 STKLD1Q8NE28 680 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 FBXL13Q8NEE6 735 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 SEMA4DQ92854 862 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 SLC35C1Q96A29 364 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 LRRC3BQ96PB8 259 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 ZNF518BQ9C0D4 1074 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 NIF3L1Q9GZT8 377 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 METTL14Q9HCE5 456 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 TMEM30AQ9NV96 361 aa16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-210ENST00000560383 BICDL2A1A5D9 508 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 F8VP50 259 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 PRAMEF12O95522 483 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 TDGF1P13385 188 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 CTHP32929 405 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 ID4P47928 161 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 NDST1P52848 882 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 CACNA2D1P54289 1103 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 NRLP54845 237 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 LRRC32Q14392 662 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 MON1AQ86VX9 555 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 CMTM8Q8IZV2 173 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 CELF5Q8N6W0 485 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 BPIFB1Q8TDL5 484 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 NELFBQ8WX92 580 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 MRPS31Q92665 395 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 FAM124BQ9H5Z6 455 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 RAB20Q9NX57 234 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 EHD2Q9NZN4 543 aa16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 MAGED2Q9UNF1 606 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 ZNF638Q14966 1978 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-210ENST00000560383 SPECC1L-ADORA2AF8WAN1 911 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms