RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FDFT1P37268 417 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 ALDH5A1P51649 535 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 MAP3K10Q02779 954 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 ACVR2BQ13705 512 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 TTC39BQ5VTQ0 682 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 WDR49Q8IV35 697 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 RNF168Q8IYW5 571 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 ICA1LQ8NDH6 482 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 CYP3A43Q9HB55 503 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 FAM171A1Q5VUB5 890 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 ANO5Q75V66 913 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 GTF3C4Q9UKN8 822 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 SLC39A10Q9ULF5 831 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 GRID1Q9ULK0 1009 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 LRRIQ3A6PVS8 624 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 MAP3K6O95382 1288 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 MAGEA4P43358 317 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 PREPLQ4J6C6 727 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 PPIL6Q8IXY8 311 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 ACSF2Q96CM8 615 aaPredicted RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 PRMT1Q99873 361 aaKnown RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 ADGRE3Q9BY15 652 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 RPS6KL1Q9Y6S9 549 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 FBXO21O94952 628 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 CXCL8P10145 99 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 KDSRQ06136 332 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 TMEM176AQ96HP8 235 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 KAZALD1Q96I82 304 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 NPHS2Q9NP85 383 aa13.97□□□□□ -0.17
TRAF3-208ENST00000560371 DDX43Q9NXZ2 648 aaKnown RBP13.97□□□□□ -0.17
TRAF3-208ENST00000560371 E2F8A0AVK6 867 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 PLSCR1O15162 318 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 CYP11B1P15538 503 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 NUMBP49757 651 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 AARS2Q5JTZ9 985 aaKnown RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 NMRK1Q9NWW6 199 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 MARCOQ9UEW3 520 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 USP18Q9UMW8 372 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 MST1RQ04912 1400 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 COL5A2P05997 1499 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 SHMT1P34896 483 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 CENPCQ03188 943 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 FLOT2Q14254 428 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 MFSD10Q14728 455 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 DACT2Q5SW24 774 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 CGRRF1Q99675 332 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 ITGA11Q9UKX5 1188 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 PSTPIP1O43586 416 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 KRT16P08779 473 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 VIL1P09327 827 aaKnown RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 MZF1P28698 734 aaPredicted RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 RARS2Q5T160 578 aaKnown RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 TMA16Q96EY4 203 aaKnown RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 THAP2Q9H0W7 228 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 NOP53Q9NZM5 478 aaKnown RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 DBR1Q9UK59 544 aaKnown RBP13.96□□□□□ -0.17
TRAF3-208ENST00000560371 SALL1Q9NSC2 1324 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 IQSEC1Q6DN90 963 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 HES6Q96HZ4 224 aa13.96□□□□□ -0.17
TRAF3-208ENST00000560371 AKAP5P24588 427 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 PDK2Q15119 407 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 ERP44Q9BS26 406 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 ZNF556Q9HAH1 456 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 AGTP01019 485 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 AMHP03971 560 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 PTPN7P35236 360 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 NCKAP1LP55160 1127 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 MYL6P60660 151 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 FHDC1Q9C0D6 1143 aaPredicted RBP13.96□□□□□ -0.18
TRAF3-208ENST00000560371 EPC1Q9H2F5 836 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 SYTL2Q9HCH5 934 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 WWOXQ9NZC7 414 aa13.96□□□□□ -0.18
TRAF3-208ENST00000560371 MSCO60682 206 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 SOAT2O75908 522 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 RHOCP08134 193 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
TRAF3-208ENST00000560371 MED21Q13503 144 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 UNC45BQ8IWX7 931 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 C4orf33Q8N1A6 199 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 ZNF518BQ9C0D4 1074 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 KCTD10Q9H3F6 313 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 MROH2AA6NES4 1674 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 SGPL1O95470 568 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 ENO3P13929 434 aaPredicted RBP13.95□□□□□ -0.18
TRAF3-208ENST00000560371 GEMP55040 296 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 HIC1Q14526 733 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 TPCN2Q8NHX9 752 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 PRPF18Q99633 342 aaKnown RBP13.95□□□□□ -0.18
TRAF3-208ENST00000560371 CNPY3Q9BT09 278 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 H2AFYO75367 372 aaKnown RBP13.95□□□□□ -0.18
TRAF3-208ENST00000560371 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 MROH9Q5TGP6 573 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 AGAP9Q5VTM2 703 aa13.95□□□□□ -0.18
TRAF3-208ENST00000560371 RFX8Q6ZV50 586 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms