RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 DUSP9Q99956 384 aaKnown RBP18.39■□□□□ 0.53
AC105339.3-201ENST00000560043 TRPC7Q9HCX4 862 aa18.39■□□□□ 0.53
AC105339.3-201ENST00000560043 LTB4R2Q9NPC1 389 aa18.39■□□□□ 0.53
AC105339.3-201ENST00000560043 TDP1Q9NUW8 608 aa18.39■□□□□ 0.53
AC105339.3-201ENST00000560043 TRPM5Q9NZQ8 1165 aa18.39■□□□□ 0.53
AC105339.3-201ENST00000560043 ARNTLO00327 626 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 USP17L7P0C7H9 530 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 PPP3CCP48454 512 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 CACNA2D1P54289 1103 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 USP46P62068 366 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 ORC1Q13415 861 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 ZNF268Q14587 947 aaPredicted RBP18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 CAMK4Q16566 473 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 TTI2Q6NXR4 508 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 PAQR9Q6ZVX9 377 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 FUKQ8N0W3 1084 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 USP13Q92995 863 aaPredicted RBP18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 TMEM30AQ9NV96 361 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 KIAA1468Q9P260 1216 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 CTNND2Q9UQB3 1225 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 PIAS3Q9Y6X2 628 aa18.38■□□□□ 0.53
AC105339.3-201ENST00000560043 NUP210Q8TEM1 1887 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 H0Y858 1186 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 NCAM2O15394 837 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 LRRN2O75325 713 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 AP1G2O75843 785 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 RTN3O95197 1032 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 CD58P19256 250 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 PDE6CP51160 858 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 KPNA1P52294 538 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 MLLT6P55198 1093 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 CCDC40Q4G0X9 1142 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 CBWD6Q4V339 395 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 CBWD3Q5JTY5 395 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 CBWD5Q5RIA9 395 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 NUP93Q8N1F7 819 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 TTC39CQ8N584 583 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 SLC2A14Q8TDB8 520 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 ATOH1Q92858 354 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 SLC35C1Q96A29 364 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 MSANTD3Q96H12 275 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 SLITRK1Q96PX8 696 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 KCNK16Q96T55 309 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 C8orf33Q9H7E9 229 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 DMAP1Q9NPF5 467 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 KRT82Q9NSB4 513 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 DLGAP2Q9P1A6 1054 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 CCL26Q9Y258 94 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 COQ4Q9Y3A0 265 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 MTF2Q9Y483 593 aaPredicted RBP18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 PTPRDP23468 1912 aa18.37■□□□□ 0.53
AC105339.3-201ENST00000560043 CILPO75339 1184 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 CKMP06732 381 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 CCDC130P13994 396 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 PFKLP17858 780 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 HDCP19113 662 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 TARSP26639 723 aaKnown RBP18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 YWHAQP27348 245 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 MAGEA9P43362 315 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 TAF10Q12962 218 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 PAK1Q13153 545 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 CC2D1AQ6P1N0 951 aaPredicted RBP18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 ARL14EPQ8N8R7 260 aaPredicted RBP18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 C12orf29Q8N999 325 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 FAM3CQ92520 227 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 ZFYVE19Q96K21 471 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 TWNKQ96RR1 684 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 CYP2S1Q96SQ9 504 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 GKN1Q9NS71 199 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 FAM49BQ9NUQ9 324 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 GCNT4Q9P109 453 aa18.36■□□□□ 0.53
AC105339.3-201ENST00000560043 CACNA1HO95180 2353 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 DENND4CQ5VZ89 1909 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 C2orf78A6NCI8 922 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 ZNF840PA6NDX5 716 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 SHISA7A6NL88 538 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 STX17P56962 302 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 IFRD2Q12894 506 aaPredicted RBP18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 C1orf228Q6PIY5 440 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 PDZD8Q8NEN9 1154 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 WHAMMQ8TF30 809 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 TATDN2Q93075 761 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 CYFIP2Q96F07 1278 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 SLC22A12Q96S37 553 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 HNRNPABQ99729 332 aaKnown RBP18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 SMOQ99835 787 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 FAM124BQ9H5Z6 455 aaPredicted RBP18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 COMMD8Q9NX08 183 aa18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 NDRG2Q9UN36 371 aaKnown RBP18.35■□□□□ 0.53
AC105339.3-201ENST00000560043 GREB1Q4ZG55 1949 aa18.34■□□□□ 0.53
AC105339.3-201ENST00000560043 TNFRSF10BO14763 440 aa18.34■□□□□ 0.53
AC105339.3-201ENST00000560043 FGFR1OPO95684 399 aaKnown RBP18.34■□□□□ 0.53
AC105339.3-201ENST00000560043 GNA14O95837 355 aa18.34■□□□□ 0.53
AC105339.3-201ENST00000560043 ABL1P00519 1130 aa18.34■□□□□ 0.53
AC105339.3-201ENST00000560043 FAM200BP0CF97 657 aa18.34■□□□□ 0.53
AC105339.3-201ENST00000560043 ADORA2BP29275 332 aa18.34■□□□□ 0.53
AC105339.3-201ENST00000560043 FMO5P49326 533 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms