RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ACO2Q99798 780 aaKnown RBP4.6□□□□□ -1.67
SPG11-218ENST00000559754 DPCDQ9BVM2 203 aaPredicted RBP4.6□□□□□ -1.67
SPG11-218ENST00000559754 RTFDC1Q9BY42 306 aaPredicted RBP4.6□□□□□ -1.67
SPG11-218ENST00000559754 TRIM54Q9BYV2 358 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 H7C1Q1 480 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 hCG_1984214I3L0E3 225 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 MYO1FO00160 1098 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 BTN3A1O00481 513 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 PPP6CO00743 305 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 TBC1D4O60343 1298 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 TUBB4AP04350 444 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 CSF1RP07333 972 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 NPR1P16066 1061 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 EPHB2P29323 1055 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 AGFG1P52594 562 aaKnown RBP4.59□□□□□ -1.67
SPG11-218ENST00000559754 PRKAG1P54619 331 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 RHBDL3P58872 404 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 CYP4F2P78329 520 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 SSBP2P81877 361 aaPredicted RBP4.59□□□□□ -1.67
SPG11-218ENST00000559754 BIRC2Q13490 618 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 NFE2Q16621 373 aaPredicted RBP4.59□□□□□ -1.67
SPG11-218ENST00000559754 DEPDC1Q5TB30 811 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 TRIM72Q6ZMU5 477 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 TPH2Q8IWU9 490 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 SUCLG2Q96I99 432 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 ZNF778Q96MU6 729 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 DPH1Q9BZG8 443 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 CXorf36Q9H7Y0 433 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 ZIM2Q9NZV7 527 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.59□□□□□ -1.67
SPG11-218ENST00000559754 GABRQQ9UN88 632 aa4.59□□□□□ -1.67
SPG11-218ENST00000559754 MRPS17Q9Y2R5 130 aaKnown RBP4.59□□□□□ -1.67
SPG11-218ENST00000559754 TISP43B9A030 160 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 PRRT4C9JH25 899 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 KCNA3P22001 575 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 SLC13A2Q13183 592 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 CTBP1Q13363 440 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 PLA1AQ53H76 456 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 MORN5Q5VZ52 161 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 ZNF626Q68DY1 528 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 ZNF425Q6IV72 752 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 CXorf57Q6NSI4 855 aaKnown RBP4.58□□□□□ -1.68
SPG11-218ENST00000559754 IZUMO1Q8IYV9 350 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 ABRAQ8N0Z2 381 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 MPP5Q8N3R9 675 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 PNLDC1Q8NA58 520 aaKnown RBP4.58□□□□□ -1.68
SPG11-218ENST00000559754 PPP1R35Q8TAP8 253 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 RSPRY1Q96DX4 576 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 RPS6KC1Q96S38 1066 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 MS4A7Q9GZW8 240 aaPredicted RBP4.58□□□□□ -1.68
SPG11-218ENST00000559754 ZMAT3Q9HA38 289 aaKnown RBP4.58□□□□□ -1.68
SPG11-218ENST00000559754 TFCP2L1Q9NZI6 479 aa4.58□□□□□ -1.68
SPG11-218ENST00000559754 SETD1BQ9UPS6 1966 aaKnown RBP4.58□□□□□ -1.68
SPG11-218ENST00000559754 UBE2Q2LH0YL09 131 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 PSMD9O00233 223 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 TSPAN6O43657 245 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 CTNND1O60716 968 aaKnown RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 TUSC2O75896 110 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 CYP2D6P10635 497 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 KITP10721 976 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 MYCLP12524 364 aaPredicted RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 EN2P19622 333 aaPredicted RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 PTGER1P34995 402 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 UBE4AQ14139 1066 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 HLTFQ14527 1009 aaKnown RBP eCLIP4.57□□□□□ -1.68
SPG11-218ENST00000559754 CERKLQ49MI3 558 aaPredicted RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 TMED8Q6PL24 325 aaPredicted RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 ZNF66Q6ZN08 573 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 CATSPERGQ6ZRH7 1159 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 EPM2AIP1Q7L775 607 aaPredicted RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 YTHDF3Q7Z739 585 aaKnown RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 ZNF280BQ86YH2 543 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 RAB11FIP4Q86YS3 637 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 ZBTB34Q8NCN2 500 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 CYP2W1Q8TAV3 490 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 BPIFB1Q8TDL5 484 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 RPL36ALQ969Q0 106 aaKnown RBP4.57□□□□□ -1.68
SPG11-218ENST00000559754 ASB2Q96Q27 587 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 ZNF518BQ9C0D4 1074 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 BHMT2Q9H2M3 363 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 PRDM16Q9HAZ2 1276 aa4.57□□□□□ -1.68
SPG11-218ENST00000559754 CAPN8A6NHC0 703 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 POC1B-GALNT4F8VUJ3 575 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 CAND2O75155 1236 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 ERBB2P04626 1255 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 CHRM5P08912 532 aaPredicted RBP4.56□□□□□ -1.68
SPG11-218ENST00000559754 NHLRC4P0CG21 123 aaPredicted RBP4.56□□□□□ -1.68
SPG11-218ENST00000559754 ADORA2AP29274 412 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 CTGFP29279 349 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 MPGP29372 298 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 GNALP38405 381 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 INSCQ1MX18 579 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 CERCAMQ5T4B2 595 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 L1TD1Q5T7N2 865 aaKnown RBP4.56□□□□□ -1.68
SPG11-218ENST00000559754 SLC18B1Q6NT16 456 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 KIRREL2Q6UWL6 708 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 NPNTQ6UXI9 565 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 MAEAQ7L5Y9 396 aa4.56□□□□□ -1.68
SPG11-218ENST00000559754 CAND1Q86VP6 1230 aaKnown RBP4.56□□□□□ -1.68
SPG11-218ENST00000559754 GLCCI1Q86VQ1 547 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms