RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 IL31Q6EBC2 164 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 EPM2AIP1Q7L775 607 aaPredicted RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 SYT13Q7L8C5 426 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 HS2ST1Q7LGA3 356 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 OR6B3Q8NGW1 331 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 CCDC26Q8TAB7 109 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 MYCBPAPQ8TBZ2 947 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 DDX1Q92499 740 aaKnown RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 PCED1BQ96HM7 432 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 CGRRF1Q99675 332 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 AGPAT3Q9NRZ7 376 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 POLR3BQ9NW08 1133 aaPredicted RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 ARHGAP26Q9UNA1 814 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 PTPRDP23468 1912 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 EML5Q05BV3 1969 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 UBE4BO95155 1302 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 MYO16Q9Y6X6 1858 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 TACC1O75410 805 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 YEATS4O95619 227 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 APBB3O95704 486 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 CST3P01034 146 aaPredicted RBP11.29□□□□□ -0.6
PCAT29-203ENST00000559212 FAM163BP0C2L3 166 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 KCNA4P22459 653 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 PPP3CCP48454 512 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 LIMK1P53667 647 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 USP46P62068 366 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 SNRPFP62306 86 aaKnown RBP11.29□□□□□ -0.6
PCAT29-203ENST00000559212 CYP24A1Q07973 514 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 TRPC3Q13507 836 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 PSMD6Q15008 389 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 UNC13DQ70J99 1090 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 NELFCDQ8IXH7 590 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 XXYLT1Q8NBI6 393 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
PCAT29-203ENST00000559212 CCDC127Q96BQ5 260 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
PCAT29-203ENST00000559212 C8orf48Q96LL4 319 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 C7orf25Q9BPX7 421 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 MRPL45Q9BRJ2 306 aaKnown RBP11.29□□□□□ -0.6
PCAT29-203ENST00000559212 TTLL2Q9BWV7 592 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 LINC00597Q9H2U6 94 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 MAGEF1Q9HAY2 307 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 PCDHGA5Q9Y5G8 931 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 CEP250Q9BV73 2442 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 ATG2BQ96BY7 2078 aa11.29□□□□□ -0.6
PCAT29-203ENST00000559212 WDR87Q6ZQQ6 2873 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 F8VP50 259 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 LEFTY2O00292 366 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 POLR2DO15514 142 aaKnown RBP11.28□□□□□ -0.6
PCAT29-203ENST00000559212 RHOBTB1O94844 696 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 ABL1P00519 1130 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
PCAT29-203ENST00000559212 MPLP40238 635 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 DGKEP52429 567 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 NOP14P78316 857 aaKnown RBP11.28□□□□□ -0.6
PCAT29-203ENST00000559212 IFRD2Q12894 506 aaPredicted RBP11.28□□□□□ -0.6
PCAT29-203ENST00000559212 ELF2Q15723 593 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 WDR72Q3MJ13 1102 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 PLK5Q496M5 336 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
PCAT29-203ENST00000559212 SHC4Q6S5L8 630 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 SCFD1Q8WVM8 642 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 ELOVL4Q9GZR5 314 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
PCAT29-203ENST00000559212 CGNQ9P2M7 1197 aaKnown RBP11.28□□□□□ -0.6
PCAT29-203ENST00000559212 EBF1Q9UH73 591 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 CPQQ9Y646 472 aa11.28□□□□□ -0.6
PCAT29-203ENST00000559212 ZNF840PA6NDX5 716 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 A8MXQ7 604 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 SLC9A3R1O14745 358 aaPredicted RBP11.27□□□□□ -0.61
PCAT29-203ENST00000559212 PHACTR2O75167 634 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 CLSTN1O94985 981 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 STAU1O95793 577 aaKnown RBP11.27□□□□□ -0.61
PCAT29-203ENST00000559212 ATICP31939 592 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 OPRD1P41143 372 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 SEC13P55735 322 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 MYL6P60660 151 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 SLC7A9P82251 487 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 ZXDBP98169 803 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 TAF10Q12962 218 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 PLA2G2CQ5R387 149 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.61
PCAT29-203ENST00000559212 FILIP1Q7Z7B0 1213 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 DDX42Q86XP3 938 aaKnown RBP eCLIP11.27□□□□□ -0.61
PCAT29-203ENST00000559212 KIAA1958Q8N8K9 716 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 TSTD1Q8NFU3 115 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.61
PCAT29-203ENST00000559212 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.61
PCAT29-203ENST00000559212 SLITRK1Q96PX8 696 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 RNF38Q9H0F5 515 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 DPEP3Q9H4B8 488 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 SMOC1Q9H4F8 434 aa11.27□□□□□ -0.61
PCAT29-203ENST00000559212 SLC39A2Q9NP94 309 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms