RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 MFSD7Q6UXD7 560 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 XYLT1Q86Y38 959 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 CPNE8Q86YQ8 564 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 PPIL6Q8IXY8 311 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 LRRC52Q8N7C0 313 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 KCTD6Q8NC69 237 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 TEKT4Q8WW24 435 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 DYDC1Q8WWB3 177 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 ATG4AQ8WYN0 398 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 TFAP2BQ92481 460 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 APBB2Q92870 758 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 HEXIM2Q96MH2 286 aaKnown RBP8.73□□□□□ -1.01
SPG11-209ENST00000558253 NT5C1AQ9BXI3 368 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 GCOM2Q9BZD3 368 aaPredicted RBP8.73□□□□□ -1.01
SPG11-209ENST00000558253 ADAM7Q9H2U9 754 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 ABHD16BQ9H3Z7 469 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 RNPEPQ9H4A4 650 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 PDZD7Q9H5P4 517 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 DPP3Q9NY33 737 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 NXF1Q9UBU9 619 aaKnown RBP8.73□□□□□ -1.01
SPG11-209ENST00000558253 SIX4Q9UIU6 781 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 LRRC37A2A6NM11 1700 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 C3orf70A6NLC5 250 aaPredicted RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 CCT8L1PA6NM43 557 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 DCDC2CA8MYV0 355 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 H0YHG0 523 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 H3BRB1 525 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 APOC4-APOC2K7ER74 178 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 PRPF4O43172 522 aaKnown RBP eCLIP8.72□□□□□ -1.01
SPG11-209ENST00000558253 MICAL2O94851 1124 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 SUN1O94901 812 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 ACSL3O95573 720 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CALCAP01258 141 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CD4P01730 458 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 APOC2P02655 101 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 ITGB3P05106 788 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CXCL8P10145 99 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CYP2C8P10632 490 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 ZFXP17010 805 aaPredicted RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 GPD1P21695 349 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CALRP27797 417 aaKnown RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 RFC1P35251 1148 aaPredicted RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 PNPLA4P41247 253 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 GPD2P43304 727 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CLCN3P51790 818 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 YARSP54577 528 aaKnown RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 PLCB3Q01970 1234 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 SLC25A11Q02978 314 aaKnown RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 ZNF252P-AS1Q0IIN9 211 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 GPS1Q13098 491 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 IFT88Q13099 833 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 KYNUQ16719 465 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 DGKDQ16760 1214 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 KLHL38Q2WGJ6 581 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 SLC10A6Q3KNW5 377 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 DUSP28Q4G0W2 176 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 PTPN20Q4JDL3 420 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 RNASEH2BQ5TBB1 312 aaKnown RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 EEF1DP3Q658K8 133 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 JADE1Q6IE81 842 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 PHLDB2Q86SQ0 1253 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 TRIM50Q86XT4 487 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CEP120Q8N960 986 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 BEST2Q8NFU1 509 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CXorf38Q8TB03 319 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 EPS8L3Q8TE67 593 aaKnown RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 CKAP2Q8WWK9 683 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 RSAD2Q8WXG1 361 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 ALKBH8Q96BT7 664 aaKnown RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 HAUS1Q96CS2 278 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 CLMNQ96JQ2 1002 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 MAGEB18Q96M61 343 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
SPG11-209ENST00000558253 DNPEPQ9ULA0 475 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 AKT3Q9Y243 479 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 PTPRFP10586 1907 aa8.72□□□□□ -1.01
SPG11-209ENST00000558253 A0A087WZ62 844 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 EXOC1LA0A1B0GW35 172 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 TMEM120BA0PK00 339 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 CFAP73A6NFT4 308 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 FAM47DPA6NHR8 397 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 SLC15A5A6NIM6 579 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 SGK1O00141 431 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 MCF2LO15068 1137 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 B4GALT5O43286 388 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 TSPAN1O60635 241 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 CST8O60676 142 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 LRCH4O75427 683 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ENDOD1O94919 500 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 TRUB2O95900 331 aaKnown RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 ADH1BP00325 375 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 NFICP08651 508 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 VIMP08670 466 aaKnown RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 GSTA2P09210 222 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 BRAFP15056 766 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ARF4P18085 180 aaPredicted RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 TGM2P21980 687 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms