RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 FAM86B1E9PN63 330 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 DYNC1I1O14576 645 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 TPD52L2O43399 206 aaKnown RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 CSDE1O75534 798 aaKnown RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 CYP3A4P08684 503 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 FAM86B2P0C5J1 330 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 SPATA31D3P0C874 917 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 MYBP10242 640 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 SCP2P22307 547 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 PMLP29590 882 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 SREBF1P36956 1147 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 GDNFP39905 211 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 NASPP49321 788 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 GLUD2P49448 558 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 DNM2P50570 870 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 PCBP3P57721 371 aaKnown RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 SHC2P98077 582 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 DSG1Q02413 1049 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 PPP2R5DQ14738 602 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ACAP1Q15027 740 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 CSRP2Q16527 193 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ZNF648Q5T619 568 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 LAIR1Q6GTX8 287 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 LILRA6Q6PI73 481 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 TSSK4Q6SA08 328 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 PARM1Q6UWI2 310 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ZNF852Q6ZMS4 543 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 SPATA31D4Q6ZUB0 917 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 GET4Q7L5D6 327 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 HEATR3Q7Z4Q2 680 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 PALB2Q86YC2 1186 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 FANCBQ8NB91 859 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ABHD4Q8TB40 342 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 FGF14Q92915 247 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 TIGD1Q96MW7 591 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 TM9SF2Q99805 663 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ZNF577Q9BSK1 485 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 MYL10Q9BUA6 226 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 SRRTQ9BXP5 876 aaKnown RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 FOXP3Q9BZS1 431 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 LNPKQ9C0E8 428 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 TGIF2Q9GZN2 237 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 PRDM14Q9GZV8 571 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 CAPN10Q9HC96 672 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 UBN1Q9NPG3 1134 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 CHST7Q9NS84 486 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 SEMA4GQ9NTN9 838 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 GFOD1Q9NXC2 390 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 TCEAL9Q9UHQ7 104 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 CDH7Q9ULB5 785 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 PCDHB2Q9Y5E7 798 aa5.4□□□□□ -1.54
ATXN3-247ENST00000557311 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.4□□□□□ -1.54
ATXN3-247ENST00000557311 ATG2AQ2TAZ0 1938 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 A0A087WZ62 844 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 SMCO2A6NFE2 343 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 LRRC10BA6NIK2 292 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 TGM5O43548 720 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 B4GALT3O60512 393 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ZRANB2O95218 330 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 PRAMEF1O95521 474 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 EFEMP2O95967 443 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 PROS1P07225 676 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 SYPP08247 313 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 HNRNPA1P09651 372 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 NEFHP12036 1026 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CD72P21854 359 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 LIFRP42702 1097 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 OR1G1P47890 313 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ADCY7P51828 1080 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 GTF2A1P52655 376 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 NAPAP54920 295 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ANTXR2P58335 489 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CREMQ03060 361 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ADCY1Q08828 1119 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 DUSP4Q13115 394 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 MTAPQ13126 283 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 GNL2Q13823 731 aaKnown RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 TARBP2Q15633 366 aaKnown RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF124Q15973 351 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 MLANAQ16655 118 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 USP41Q3LFD5 358 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 N4BP2L1Q5TBK1 243 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 FYB2Q5VWT5 728 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 IL31Q6EBC2 164 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF280DQ6N043 979 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF771Q7L3S4 317 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CATSPER4Q7RTX7 472 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 GRASPQ7Z6J2 395 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF410Q86VK4 478 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 MB21D2Q8IYB1 491 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 OXR1Q8N573 874 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CNNM3Q8NE01 707 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ST13P5Q8NFI4 369 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ENOX1Q8TC92 643 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms