RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MGAT4DA6NG13 374 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 QPRTQ15274 297 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 PFKFB3Q16875 520 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CYB5D1Q6P9G0 228 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 PM20D2Q8IYS1 436 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 OR7A2PQ8NGA2 310 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TMEM79Q9BSE2 394 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 PCDHGA4Q9Y5G9 962 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 RBP1P09455 135 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TSPAN19P0C672 248 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TRAF2Q12933 501 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 MYBPC2Q14324 1141 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 USP10Q14694 798 aaKnown RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CXXC5Q7LFL8 322 aaKnown RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ADCK2Q7Z695 626 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ZBTB10Q96DT7 871 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF879B4DU55 563 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF284Q2VY69 593 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TCHHL1Q5QJ38 904 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CHPFQ8IZ52 775 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TRPV1Q8NER1 839 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 AKAP1Q92667 903 aaKnown RBP eCLIP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 SLC38A7Q9NVC3 462 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CCNL1Q9UK58 526 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 SNAP91O60641 907 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 MUTP22033 750 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ETFBP38117 255 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ANKRD40Q6AI12 368 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TTC30AQ86WT1 665 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TTC30BQ8N4P2 665 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ITCHQ96J02 903 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CMTM6Q9NX76 183 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 PRAG1Q86YV5 1406 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 NR4A1P22736 598 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 S100A2P29034 98 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 USPL1Q5W0Q7 1092 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 EEF1AKMT1Q8WVE0 214 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 OTUD5Q96G74 571 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 SMURF2Q9HAU4 748 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 NEU2Q9Y3R4 380 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 XDHP47989 1333 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 PREPLQ4J6C6 727 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ATP6AP1LQ52LC2 224 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 LNPEPQ9UIQ6 1025 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 NFICP08651 508 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 UBTFL6P0CB48 400 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 NPR2P20594 1047 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ADHFE1Q8IWW8 467 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 GPKOWQ92917 476 aaPredicted RBP eCLIP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 FAM89AQ96GI7 184 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 C12orf66Q96MD2 445 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TMCO1Q9UM00 188 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TNFRSF21O75509 655 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 GARTP22102 1010 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 PIK3CGP48736 1102 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RPS6P62753 249 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 FAM83BQ5T0W9 1011 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CATSPER4Q7RTX7 472 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 HNRNPLLQ8WVV9 542 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 AIFM2Q9BRQ8 373 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CITO14578 2027 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 PSMD11O00231 422 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 ADSLP30566 484 aaPredicted RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 VAMP7P51809 220 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 HK2P52789 917 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 TTC29Q8NA56 475 aaPredicted RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 LEMD3Q9Y2U8 911 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 ABCC2Q92887 1545 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 KNOP1Q1ED39 458 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SV2CQ496J9 727 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 C5orf22Q49AR2 442 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SNRNP27Q8WVK2 155 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 NOL6Q9H6R4 1146 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 TMEM120BA0PK00 339 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 GLRA3O75311 464 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SERPIND1P05546 499 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 ALFQ53S48 1182 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 MYDGFQ969H8 173 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CLIC4Q9Y696 253 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 BST2Q10589 180 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CCDC144BQ3MJ40 725 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RABL6Q3YEC7 729 aaPredicted RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 TWF2Q6IBS0 349 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 FSTL5Q8N475 847 aaPredicted RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 DHX35Q9H5Z1 703 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 VCPKMTQ9H867 229 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RXFP1Q9HBX9 757 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 IREB2P48200 963 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CDH4P55283 916 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 SCRN1Q12765 414 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 EIF4A2Q14240 407 aaKnown RBP9.12□□□□□ -0.95
SYNE3-205ENST00000557275 RPTNQ6XPR3 784 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 OR52L1Q8NGH7 329 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 MS4A14Q96JA4 679 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 TEX13BQ9BXU2 312 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 CCNB1IP1Q9NPC3 277 aa9.12□□□□□ -0.95
SYNE3-205ENST00000557275 MCUBQ9NWR8 336 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms