RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 U2AF1Q01081 240 aaKnown RBP eCLIP6.3□□□□□ -1.4
HIF1A-209ENST00000556827 OCA2Q04671 838 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 GRM3Q14832 879 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 CCDC93Q567U6 631 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 PRIMA1Q86XR5 153 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 FAM90A1Q86YD7 464 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 C16orf71Q8IYS4 520 aaPredicted RBP6.3□□□□□ -1.4
HIF1A-209ENST00000556827 TMEM132CQ8N3T6 1108 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 NLGN4YQ8NFZ3 816 aaPredicted RBP6.3□□□□□ -1.4
HIF1A-209ENST00000556827 TNPO1Q92973 898 aaKnown RBP6.3□□□□□ -1.4
HIF1A-209ENST00000556827 SLC35A4Q96G79 324 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 POLR3GLQ9BT43 218 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 TLR10Q9BXR5 811 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 SYNPO2LQ9H987 977 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 USP25Q9UHP3 1055 aa6.3□□□□□ -1.4
HIF1A-209ENST00000556827 RGPD5Q99666 1765 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 TUSC2O75896 110 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 ARIH2O95376 493 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 ELANEP08246 267 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 EGR2P11161 476 aaPredicted RBP6.29□□□□□ -1.4
HIF1A-209ENST00000556827 CKBP12277 381 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 TYRP1P17643 537 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 GCSHP23434 173 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 PSMC1P62191 440 aaKnown RBP6.29□□□□□ -1.4
HIF1A-209ENST00000556827 SLFN5Q08AF3 891 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 FOXI1Q12951 378 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 MPP3Q13368 585 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 PLEKHO1Q53GL0 409 aaPredicted RBP6.29□□□□□ -1.4
HIF1A-209ENST00000556827 ZNF365Q70YC5 407 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 TMIEQ8NEW7 156 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 CDK5RAP3Q96JB5 506 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 B3GNT5Q9BYG0 378 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 MRPL46Q9H2W6 279 aaKnown RBP6.29□□□□□ -1.4
HIF1A-209ENST00000556827 VSX1Q9NZR4 365 aaPredicted RBP6.29□□□□□ -1.4
HIF1A-209ENST00000556827 JKAMPQ9P055 326 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 FEZ2Q9UHY8 353 aaPredicted RBP6.29□□□□□ -1.4
HIF1A-209ENST00000556827 ASAP1Q9ULH1 1129 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 PCDHA6Q9UN73 950 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 USP54Q70EL1 1684 aa6.29□□□□□ -1.4
HIF1A-209ENST00000556827 FAM208AQ9UK61 1670 aaKnown RBP6.29□□□□□ -1.4
HIF1A-209ENST00000556827 GOLGA6CA6NDK9 693 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 GOLGA6BA6NDN3 693 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 ERVV-2B6SEH9 535 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 TOMM70O94826 608 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 ESRRBO95718 433 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 GOLGA6DP0CG33 693 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 FCER1AP12319 257 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 PHKG2P15735 406 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 FGFR4P22455 802 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 PLA2G5P39877 138 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 TNNT2P45379 298 aaPredicted RBP6.28□□□□□ -1.4
HIF1A-209ENST00000556827 PIK3CGP48736 1102 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 HSD11B2P80365 405 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 MRPS21P82921 87 aaKnown RBP6.28□□□□□ -1.4
HIF1A-209ENST00000556827 GFOD2Q3B7J2 385 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 AMOTQ4VCS5 1084 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 C1orf141Q5JVX7 400 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 B3GNTL1Q67FW5 361 aaPredicted RBP6.28□□□□□ -1.4
HIF1A-209ENST00000556827 FOXR2Q6PJQ5 311 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 NPNTQ6UXI9 565 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 SLC17A8Q8NDX2 589 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 ZNF764Q96H86 408 aaPredicted RBP6.28□□□□□ -1.4
HIF1A-209ENST00000556827 KLHL32Q96NJ5 620 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 IMPG2Q9BZV3 1241 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 WDCPQ9H6R7 721 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 OBP2AQ9NY56 170 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 GOLGA6AQ9NYA3 693 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 HSFX1Q9UBD0 423 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 CPA4Q9UI42 421 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 INSL6Q9Y581 213 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 LTN1O94822 1766 aa6.28□□□□□ -1.4
HIF1A-209ENST00000556827 A0A0G2JLW4 131 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 ERC2O15083 957 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 MATN4O95460 622 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 GPANK1O95872 356 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 GJB1P08034 283 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 HDCP19113 662 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 CLK3P49761 638 aaKnown RBP6.27□□□□□ -1.41
HIF1A-209ENST00000556827 RAB1AP62820 205 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 CXADRP78310 365 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 EXOSC9Q06265 439 aaKnown RBP6.27□□□□□ -1.41
HIF1A-209ENST00000556827 RD3Q7Z3Z2 195 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 GPR149Q86SP6 731 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 DAAM2Q86T65 1068 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 NSUN7Q8NE18 718 aaKnown RBP6.27□□□□□ -1.41
HIF1A-209ENST00000556827 TIFAQ96CG3 184 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 Q96MF0 132 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 BBC3Q96PG8 261 aaPredicted RBP6.27□□□□□ -1.41
HIF1A-209ENST00000556827 BRD9Q9H8M2 597 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 GALNT9Q9HCQ5 603 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 C1orf112Q9NSG2 853 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 TBCCD1Q9NVR7 557 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 MRPS18AQ9NVS2 196 aaKnown RBP6.27□□□□□ -1.41
HIF1A-209ENST00000556827 CDYLQ9Y232 598 aa6.27□□□□□ -1.41
HIF1A-209ENST00000556827 MTO1Q9Y2Z2 717 aaKnown RBP6.27□□□□□ -1.41
HIF1A-209ENST00000556827 FRMPD2Q68DX3 1309 aaPredicted RBP6.26□□□□□ -1.41
HIF1A-209ENST00000556827 A0A088AWK7 358 aa6.26□□□□□ -1.41
HIF1A-209ENST00000556827 ZNF785A8K8V0 405 aa6.26□□□□□ -1.41
HIF1A-209ENST00000556827 E9PLN8 166 aa6.26□□□□□ -1.41
HIF1A-209ENST00000556827 MASP2O00187 686 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms