RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 TAF12Q16514 161 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 EXOC3L4Q17RC7 722 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 IER5LQ5T953 404 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 CWF19L1Q69YN2 538 aaKnown RBP23.9■■□□□ 1.42
PABPN1-206ENST00000556809 VITQ6UXI7 678 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 SCN4BQ8IWT1 228 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 RSPRY1Q96DX4 576 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 TNIP3Q96KP6 325 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 SPATA17Q96L03 361 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 CEP295NLQ96MC4 621 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 B3GNT5Q9BYG0 378 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 VPS16Q9H269 839 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 CISHQ9NSE2 258 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 TMEM30AQ9NV96 361 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 ANAPC1Q9H1A4 1944 aa23.89■■□□□ 1.42
PABPN1-206ENST00000556809 CILPO75339 1184 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 GPR158Q5T848 1215 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 TRIM65Q6PJ69 517 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 CRYBG2Q8N1P7 616 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 PPM1KQ8N3J5 372 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 SLC46A2Q9BY10 475 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 SLITRK6Q9H5Y7 841 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 TASP1Q9H6P5 420 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 CA14Q9ULX7 337 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 COL4A2P08572 1712 aa23.89■■□□□ 1.41
PABPN1-206ENST00000556809 ZNF638Q14966 1978 aaKnown RBP23.89■■□□□ 1.41
PABPN1-206ENST00000556809 TADA3O75528 432 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ATP1A3P13637 1013 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 SLC9A1P19634 815 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 CLCN5P51795 746 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 COPB1P53618 953 aaKnown RBP23.88■■□□□ 1.41
PABPN1-206ENST00000556809 CACNA2D1P54289 1103 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 YWHAEP62258 255 aaKnown RBP23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ORC1Q13415 861 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ARHGAP15Q53QZ3 475 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ASTLQ6HA08 431 aaPredicted RBP23.88■■□□□ 1.41
PABPN1-206ENST00000556809 LRSAM1Q6UWE0 723 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 PAQR9Q6ZVX9 377 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ACOT1Q86TX2 421 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ARID3BQ8IVW6 561 aaPredicted RBP23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ARHGEF19Q8IW93 802 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 WHAMMQ8TF30 809 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 C8orf48Q96LL4 319 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 TWNKQ96RR1 684 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 NT5C1AQ9BXI3 368 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ZNF518BQ9C0D4 1074 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 KCNH6Q9H252 994 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 ARHGEF3Q9NR81 526 aa23.88■■□□□ 1.41
PABPN1-206ENST00000556809 MAGED2Q9UNF1 606 aaPredicted RBP23.88■■□□□ 1.41
PABPN1-206ENST00000556809 COL4A3Q01955 1670 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 SOBPA7XYQ1 873 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 PSMC3P17980 439 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 TRIM21P19474 475 aaKnown RBP23.87■■□□□ 1.41
PABPN1-206ENST00000556809 PON1P27169 355 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 GRIK1P39086 918 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 GCNT1Q02742 428 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 PHLDB3Q6NSJ2 640 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 RRAGAQ7L523 313 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 LUZP1Q86V48 1076 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 MFSD6LQ8IWD5 586 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 TMEM105Q8N8V8 129 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 E2F7Q96AV8 911 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 LRRC3BQ96PB8 259 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 GCNAQ96QF7 691 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 ELOVL4Q9GZR5 314 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 DNAI2Q9GZS0 605 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 MFSD1Q9H3U5 465 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 UXTQ9UBK9 157 aaPredicted RBP23.87■■□□□ 1.41
PABPN1-206ENST00000556809 ZMYM5Q9UJ78 669 aa23.87■■□□□ 1.41
PABPN1-206ENST00000556809 LRRC10BA6NIK2 292 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 HEPACAM2A8MVW5 462 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 CLDN5O00501 218 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 TRIM66O15016 1216 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 PFKPQ01813 784 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 GRM2Q14416 872 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 UBR7Q8N806 425 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 DEPDC1BQ8WUY9 529 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 KAT5Q92993 513 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 TRMT61BQ9BVS5 477 aaKnown RBP23.86■■□□□ 1.41
PABPN1-206ENST00000556809 TSPY26PQ9H489 355 aa23.86■■□□□ 1.41
PABPN1-206ENST00000556809 F8VP50 259 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 PRAMEF12O95522 483 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 AOC1P19801 751 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 DDX6P26196 483 aaKnown RBP eCLIP23.85■■□□□ 1.412e-15■■□□□ 14
PABPN1-206ENST00000556809 STARD6P59095 220 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 USP46P62068 366 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 FCHO2Q0JRZ9 810 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 SLC44A4Q53GD3 710 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 ZNF394Q53GI3 561 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 DENND5BQ6ZUT9 1274 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 APTXQ7Z2E3 356 aaKnown RBP23.85■■□□□ 1.41
PABPN1-206ENST00000556809 GPIHBP1Q8IV16 184 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 CMTM8Q8IZV2 173 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 FUKQ8N0W3 1084 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 FLCNQ8NFG4 579 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 DDX23Q9BUQ8 820 aaKnown RBP23.85■■□□□ 1.41
PABPN1-206ENST00000556809 TTLL2Q9BWV7 592 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 UBE2TQ9NPD8 197 aaPredicted RBP23.85■■□□□ 1.41
PABPN1-206ENST00000556809 OBP2AQ9NY56 170 aa23.85■■□□□ 1.41
PABPN1-206ENST00000556809 APEX2Q9UBZ4 518 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms