RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GTPBP4Q9BZE4 634 aaKnown RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 C8orf33Q9H7E9 229 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 LTB4R2Q9NPC1 389 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 RMND1Q9NWS8 449 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 OBP2AQ9NY56 170 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 HPSEQ9Y251 543 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ZDHHC9Q9Y397 364 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 PIAS3Q9Y6X2 628 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 A8MXQ7 604 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 TACC1O75410 805 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 MOSPD3O75425 235 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CST3P01034 146 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 NR3C1P04150 777 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 KRT13P13646 458 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 WARSP23381 471 aaKnown RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 FCARP24071 287 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 WEE1P30291 646 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 NBL1P41271 181 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 MAGEA11P43364 429 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 FCHO2Q0JRZ9 810 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ZNF211Q13398 564 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 SGSM1Q2NKQ1 1148 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ZNF699Q32M78 642 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ZNF667Q5HYK9 610 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 KRBA2Q6ZNG9 492 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 MAB21L3Q8N8X9 362 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CXorf38Q8TB03 319 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 MYCBPAPQ8TBZ2 947 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 BPIFB1Q8TDL5 484 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 PARD3BQ8TEW8 1205 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 TMEM174Q8WUU8 243 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ATRIPQ8WXE1 791 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 TNIP3Q96KP6 325 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 TDP1Q9NUW8 608 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 NDRG2Q9UN36 371 aaKnown RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 MYO10Q9HD67 2058 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 PTPRZ1P23471 2315 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-222ENST00000556768 ATP8B3O60423 1300 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 FAM237AA0A1B0GTK4 181 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 MYBPHLA2RUH7 354 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 PROB1E7EW31 1015 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 KLRC4O43908 158 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 RHOBTB3O94955 611 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 SMC2O95347 1197 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 STAU1O95793 577 aaKnown RBP7.81□□□□□ -1.16
SCFD1-222ENST00000556768 CKMP06732 381 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 BDNFP23560 247 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 NR2F2P24468 414 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 LMO2P25791 158 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 RPS9P46781 194 aaKnown RBP7.81□□□□□ -1.16
SCFD1-222ENST00000556768 PPP3CCP48454 512 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 NLRP12P59046 1061 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 PSMC1P62191 440 aaKnown RBP7.81□□□□□ -1.16
SCFD1-222ENST00000556768 CYP4F8P98187 520 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 LRRC32Q14392 662 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 KCNB1Q14721 858 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 FAM171BQ6P995 826 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 DENND5BQ6ZUT9 1274 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 INTS8Q75QN2 995 aaKnown RBP7.81□□□□□ -1.16
SCFD1-222ENST00000556768 MON1AQ86VX9 555 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 KIAA0895Q8NCT3 520 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 TRMT2BQ96GJ1 504 aaKnown RBP7.81□□□□□ -1.16
SCFD1-222ENST00000556768 IER2Q9BTL4 223 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 SLC46A2Q9BY10 475 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 KIF9Q9HAQ2 790 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 TRPC7Q9HCX4 862 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 TMLHEQ9NVH6 421 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 FBXO4Q9UKT5 387 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 TRAF3IP3Q9Y228 551 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 ZNF318Q5VUA4 2279 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 PTPRJQ12913 1337 aa7.81□□□□□ -1.16
SCFD1-222ENST00000556768 TRAV19A0A0A6YYK7 116 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 SLC38A8A6NNN8 435 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 DXOO77932 396 aaKnown RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 USP17L7P0C7H9 530 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 HMGA1P17096 107 aaKnown RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 PTPN1P18031 435 aaKnown RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 CCNE1P24864 410 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 PSMC2P35998 433 aaKnown RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 NRLP54845 237 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 MYL6P60660 151 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 TAGLNQ01995 201 aaKnown RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 ADAM9Q13443 819 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 MDH1BQ5I0G3 518 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 STXBP5Q5T5C0 1151 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 TDRD10Q5VZ19 366 aaKnown RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 TXNDC8Q6A555 127 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 FRMD5Q7Z6J6 570 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 RALGPS2Q86X27 583 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 GUF1Q8N442 669 aaKnown RBP7.8□□□□□ -1.16
SCFD1-222ENST00000556768 TTC16Q8NEE8 873 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 KBTBD7Q8WVZ9 684 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 TAF4BQ92750 862 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 CLDN23Q96B33 292 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 PCED1BQ96HM7 432 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 FAM84AQ96KN4 292 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 SPATA17Q96L03 361 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 MYRFLQ96LU7 910 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 SLITRK1Q96PX8 696 aa7.8□□□□□ -1.16
SCFD1-222ENST00000556768 ARHGAP9Q9BRR9 750 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms