RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ZNF77Q15935 545 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 SGSM1Q2NKQ1 1148 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 ARHGAP29Q52LW3 1261 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 CAVIN1Q6NZI2 390 aaKnown RBP10.99□□□□□ -0.65
SHMT2-224ENST00000556737 TXNDC11Q6PKC3 985 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 DENND5BQ6ZUT9 1274 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 FRMD5Q7Z6J6 570 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 C1orf210Q8IVY1 113 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 YAF2Q8IY57 180 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 SMARCE1Q969G3 411 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 CHFRQ96EP1 664 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 TWNKQ96RR1 684 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 NIF3L1Q9GZT8 377 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 TMEM8AQ9HCN3 771 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 HPS4Q9NQG7 708 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 TDP1Q9NUW8 608 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 GTSE1Q9NYZ3 720 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 MAN1B1Q9UKM7 699 aa10.99□□□□□ -0.65
SHMT2-224ENST00000556737 MAN2B1O00754 1011 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 TNFRSF10BO14763 440 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 SLC16A3O15427 465 aaKnown RBP10.98□□□□□ -0.65
SHMT2-224ENST00000556737 OLFM2O95897 454 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 KRT13P13646 458 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 P4HA1P13674 534 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 CCDC130P13994 396 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
SHMT2-224ENST00000556737 ANXA13P27216 316 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 GTF2H1P32780 548 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 CTHP32929 405 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 AVPR1AP37288 418 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 MXI1P50539 228 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 NDST1P52848 882 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 KLHL40Q2TBA0 621 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 ANKRD40Q6AI12 368 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 ACOT1Q86TX2 421 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 UNC93AQ86WB7 457 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 ZMIZ2Q8NF64 920 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 GPT2Q8TD30 523 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 FAM3CQ92520 227 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 SEMA4DQ92854 862 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 MSANTD3Q96H12 275 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 FAM83CQ9BQN1 747 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 CHRDQ9H2X0 955 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 MMRN2Q9H8L6 949 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 TRPC7Q9HCX4 862 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHMT2-224ENST00000556737 PRMT8Q9NR22 394 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-224ENST00000556737 KRT82Q9NSB4 513 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 NDRG2Q9UN36 371 aaKnown RBP10.98□□□□□ -0.65
SHMT2-224ENST00000556737 F5P12259 2224 aa10.98□□□□□ -0.65
SHMT2-224ENST00000556737 TRAV19A0A0A6YYK7 116 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 PRR23AA6NEV1 266 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 OTOL1A6NHN0 477 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-224ENST00000556737 SPECC1L-ADORA2AF8WAN1 911 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CETN3O15182 167 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 KINO60870 393 aaKnown RBP10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CLSTN1O94985 981 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 OAS1P00973 400 aaKnown RBP10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CKMP06732 381 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 SP9P0CG40 484 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 EPB41P11171 864 aaKnown RBP10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CHRNB1P11230 501 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 TCF3P15923 654 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CCNE1P24864 410 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 ZXDBP98169 803 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 LRRC63Q05C16 580 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 MTF1Q14872 753 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CBWD6Q4V339 395 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CBWD3Q5JTY5 395 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CBWD5Q5RIA9 395 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 KRT39Q6A163 491 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 TRIM68Q6AZZ1 485 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CRYBG2Q8N1P7 616 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 ARL14EPQ8N8R7 260 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-224ENST00000556737 TTC8Q8TAM2 541 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CSGALNACT1Q8TDX6 532 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 WHAMMQ8TF30 809 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 SMARCD1Q96GM5 515 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 TNIP3Q96KP6 325 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CYP2S1Q96SQ9 504 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 KCNK16Q96T55 309 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 NELL2Q99435 816 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 SMOQ99835 787 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 C8orf33Q9H7E9 229 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CSNK1G1Q9HCP0 422 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 FAM49BQ9NUQ9 324 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 ARHGAP26Q9UNA1 814 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 MRPS17Q9Y2R5 130 aaKnown RBP10.97□□□□□ -0.65
SHMT2-224ENST00000556737 ATP8B3O60423 1300 aa10.97□□□□□ -0.65
SHMT2-224ENST00000556737 CACNA1IQ9P0X4 2223 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 FAM92AA1XBS5 289 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 ZNF840PA6NDX5 716 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 GFRA3O60609 400 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 CILPO75339 1184 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 BEST1O76090 585 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 USP17L7P0C7H9 530 aa10.96□□□□□ -0.65
SHMT2-224ENST00000556737 TDGF1P13385 188 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms