RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SPDYCQ5MJ68 293 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 SLC39A4Q6P5W5 647 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 RABEPKQ7Z6M1 372 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 FILIP1Q7Z7B0 1213 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 GPBP1Q86WP2 473 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 PNMA5Q96PV4 448 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 PNKPQ96T60 521 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 REEP2Q9BRK0 252 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 CCDC86Q9H6F5 360 aaKnown RBP14.95□□□□□ -0.02
ACTN1-219ENST00000556432 GCNT4Q9P109 453 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 GTF3C4Q9UKN8 822 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 ODF2LQ9ULJ1 636 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 ACACAQ13085 2346 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 LEFTY2O00292 366 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 KAT7O95251 611 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 SERPINF2P08697 491 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 SLC6A11P48066 632 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 ATP2C1P98194 919 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-219ENST00000556432 CCDC142Q17RM4 750 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 HSF5Q4G112 596 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-219ENST00000556432 EMC10Q5UCC4 262 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 LRRC15Q8TF66 581 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 CAMK1GQ96NX5 476 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 ACBD6Q9BR61 282 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 PARVGQ9HBI0 331 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 ARHGEF4Q9NR80 690 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 SMPD4Q9NXE4 827 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
ACTN1-219ENST00000556432 L1RE1Q9UN81 338 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 LOC400499M0QZD8 3231 aa14.94□□□□□ -0.02
ACTN1-219ENST00000556432 FAM221BA6H8Z2 402 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TISP43B9A030 160 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 ANKRD63C9JTQ0 380 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 SLC9A3R1O14745 358 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TRAK2O60296 914 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TBCAO75347 108 aaKnown RBP14.93□□□□□ -0.02
ACTN1-219ENST00000556432 ADH1CP00326 375 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 SYPP08247 313 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TCF3P15923 654 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 POLR2BP30876 1174 aaKnown RBP14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TFAMQ00059 246 aaKnown RBP14.93□□□□□ -0.02
ACTN1-219ENST00000556432 MESP2Q0VG99 397 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 DHCR24Q15392 516 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TRIP6Q15654 476 aaKnown RBP14.93□□□□□ -0.02
ACTN1-219ENST00000556432 GAB4Q2WGN9 574 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 ARSHQ5FYA8 562 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 HYIQ5T013 277 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 SLFN12LQ6IEE8 588 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 SLC36A4Q6YBV0 504 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 PNPLA1Q8N8W4 532 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 HNRNPLLQ8WVV9 542 aaKnown RBP14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TRPM5Q9NZQ8 1165 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 AGAP1Q9UPQ3 857 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 TNRC6BQ9UPQ9 1833 aaKnown RBP14.93□□□□□ -0.02
ACTN1-219ENST00000556432 PTPRDP23468 1912 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 ADAMTS9Q9P2N4 1935 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 APC2O95996 2303 aa14.93□□□□□ -0.02
ACTN1-219ENST00000556432 VWA3AA6NCI4 1184 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 ARHGAP33O14559 1287 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 ZBTB24O43167 697 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-219ENST00000556432 SH3BP5O60239 455 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 ADAM23O75077 832 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 IL18RAPO95256 599 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 ABL1P00519 1130 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 ITGB3P05106 788 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 FTH1P19P0C7X4 201 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 CD59P13987 128 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 PCSK1P29120 753 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 GRIA2P42262 883 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 HMGN5P82970 282 aaKnown RBP14.92□□□□□ -0.02
ACTN1-219ENST00000556432 ZNF33AQ06730 810 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 PEAR1Q5VY43 1037 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-219ENST00000556432 TMEM86AQ8N2M4 240 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 KCTD17Q8N5Z5 321 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 MDM1Q8TC05 714 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 POMGNT1Q8WZA1 660 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 LRIG1Q96JA1 1093 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 LLPHQ9BRT6 129 aaKnown RBP14.92□□□□□ -0.02
ACTN1-219ENST00000556432 CAPN10Q9HC96 672 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 RAXQ9Y2V3 346 aa14.92□□□□□ -0.02
ACTN1-219ENST00000556432 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-219ENST00000556432 CAPNS1P04632 268 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 KRT19P08727 400 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 ADH5P11766 374 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 ANXA13P27216 316 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 ABCD1P33897 745 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 GRIK1P39086 918 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 EIF2DP41214 584 aaKnown RBP14.91□□□□□ -0.02
ACTN1-219ENST00000556432 ZXDBP98169 803 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 PLEKHG6Q3KR16 790 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 CFAP221Q4G0U5 840 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 TMEM119Q4V9L6 283 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 C4orf50Q6ZRC1 276 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 C12orf40Q86WS4 652 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 ADGRF2Q8IZF7 708 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 RGL4Q8IZJ4 473 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 RASSF8Q8NHQ8 419 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 KCNN1Q92952 543 aa14.91□□□□□ -0.02
ACTN1-219ENST00000556432 FUBP3Q96I24 572 aaKnown RBP eCLIP14.91□□□□□ -0.02
ACTN1-219ENST00000556432 CALCOCO1Q9P1Z2 691 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms