RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 NDST1P52848 882 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 CCDC40Q4G0X9 1142 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 CBWD6Q4V339 395 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 CBWD3Q5JTY5 395 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 CBWD5Q5RIA9 395 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 CWF19L1Q69YN2 538 aaKnown RBP12.27□□□□□ -0.45
SLIRP-205ENST00000556310 VITQ6UXI7 678 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 FAM35AQ86V20 835 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 SEMA4DQ92854 862 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 C8orf48Q96LL4 319 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 PLA2G2FQ9BZM2 168 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-205ENST00000556310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.27□□□□□ -0.456e-11■■■■■ 34.8
SLIRP-205ENST00000556310 LMBRD1Q9NUN5 540 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 RAB20Q9NX57 234 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 HMGXB4Q9UGU5 601 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 CA14Q9ULX7 337 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 MAGED2Q9UNF1 606 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-205ENST00000556310 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 NCANO14594 1321 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 MYO16Q9Y6X6 1858 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 SOBPA7XYQ1 873 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 LRRN2O75325 713 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 GNA14O95837 355 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 NPR3P17342 541 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 PSMC3P17980 439 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 VIPR2P41587 438 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 VCPP55072 806 aaKnown RBP12.26□□□□□ -0.45
SLIRP-205ENST00000556310 STX17P56962 302 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 GRM2Q14416 872 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 WDR44Q5JSH3 913 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 DENND5BQ6ZUT9 1274 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 ACOT1Q86TX2 421 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 ARID3BQ8IVW6 561 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-205ENST00000556310 CRYBG2Q8N1P7 616 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 FLCNQ8NFG4 579 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 MRPS31Q92665 395 aaKnown RBP12.26□□□□□ -0.45
SLIRP-205ENST00000556310 DNASE1L2Q92874 299 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 RSPRY1Q96DX4 576 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 SMARCD1Q96GM5 515 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 TTLL2Q9BWV7 592 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 KCNH6Q9H252 994 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 OBP2AQ9NY56 170 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 EHD2Q9NZN4 543 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 RWDD2AQ9UIY3 292 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
SLIRP-205ENST00000556310 CACNA1HO95180 2353 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 HEPACAM2A8MVW5 462 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 CLDN5O00501 218 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 PMM2O15305 246 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 CILPO75339 1184 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 PRAMEF12O95522 483 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 AOC1P19801 751 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 RFX1P22670 979 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 AVPR2P30518 371 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 FMO5P49326 533 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 CLCN5P51795 746 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 CACNA2D1P54289 1103 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 MARSP56192 900 aaKnown RBP12.25□□□□□ -0.45
SLIRP-205ENST00000556310 PRKCQQ04759 706 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 FCHO2Q0JRZ9 810 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 ORC1Q13415 861 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 MLF2Q15773 248 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-205ENST00000556310 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 MFSD6LQ8IWD5 586 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 CMTM8Q8IZV2 173 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 FUKQ8N0W3 1084 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 TTC39CQ8N584 583 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 MLKLQ8NB16 471 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 IRF7Q92985 503 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 TWNKQ96RR1 684 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 MED10Q9BTT4 135 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 TRMT61BQ9BVS5 477 aaKnown RBP12.25□□□□□ -0.45
SLIRP-205ENST00000556310 NT5C1AQ9BXI3 368 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 SLC46A2Q9BY10 475 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 BRD9Q9H8M2 597 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 DMAP1Q9NPF5 467 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-205ENST00000556310 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
SLIRP-205ENST00000556310 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 P4HA2O15460 535 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 AP1G2O75843 785 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 FGFR1OPO95684 399 aaKnown RBP12.24□□□□□ -0.45
SLIRP-205ENST00000556310 F5P12259 2224 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 CCDC130P13994 396 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 CD58P19256 250 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 GDI1P31150 447 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 AVPR1AP37288 418 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 USP46P62068 366 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 TXNDC8Q6A555 127 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 PAQR9Q6ZVX9 377 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 MON1AQ86VX9 555 aa12.24□□□□□ -0.45
SLIRP-205ENST00000556310 TRIM59Q8IWR1 403 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms