RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GPM6BQ13491 265 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 ARHGAP29Q52LW3 1261 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 TPGS2Q68CL5 300 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 PDE12Q6L8Q7 609 aaKnown RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 VSTM1Q6UX27 236 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 RSPO2Q6UXX9 243 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MAMSTRQ6ZN01 415 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MMS22LQ6ZRQ5 1243 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 CLEC20AQ6ZU45 233 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MON1BQ7L1V2 547 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MCOLN2Q8IZK6 566 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 SPPL2BQ8TCT7 592 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MICAL1Q8TDZ2 1067 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 SLC35F5Q8WV83 523 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 POF1BQ8WVV4 589 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 ZNF653Q96CK0 615 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 PGLYRP2Q96PD5 576 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 CLSTN3Q9BQT9 956 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 C11orf70Q9BRQ4 267 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 EMILIN2Q9BXX0 1053 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 PACSIN1Q9BY11 444 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 RHOBTB2Q9BYZ6 727 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 UBXN6Q9BZV1 441 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 RXFP1Q9HBX9 757 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 NGRNQ9NPE2 291 aaKnown RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 DMAP1Q9NPF5 467 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 CYLDQ9NQC7 956 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 KCND1Q9NSA2 647 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
TMEM260-208ENST00000555905 MTMR11A4FU01 709 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 TRIM66O15016 1216 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 GRM6O15303 877 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ADAM12O43184 909 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 KRT86O43790 486 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 LILRB3O75022 631 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ADH1AP07327 375 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 CYP2F1P24903 491 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ACADSBP45954 432 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 PLA2G4AP47712 749 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 RGS7P49802 495 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ERVFC1P60507 584 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 RAB33AQ14088 237 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 PLPP4Q5VZY2 271 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 PMF1Q6P1K2 205 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ZNF662Q6ZS27 426 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 SPRED2Q7Z698 418 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 MRPL43Q8N983 215 aaKnown RBP11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ATAD1Q8NBU5 361 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ZNF461Q8TAF7 563 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 ARNTL2Q8WYA1 636 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 TIFAQ96CG3 184 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 C18orf8Q96DM3 657 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 HSFY1Q96LI6 401 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 SMOQ99835 787 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 THAP2Q9H0W7 228 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 CSNK1G1Q9HCP0 422 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 SCUBE2Q9NQ36 999 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
TMEM260-208ENST00000555905 AFF4Q9UHB7 1163 aaKnown RBP11.64□□□□□ -0.55
TMEM260-208ENST00000555905 CYTH4Q9UIA0 394 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 MAFFQ9ULX9 164 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 IRAK3Q9Y616 596 aa11.64□□□□□ -0.55
TMEM260-208ENST00000555905 WDR27A2RRH5 827 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 TULP2O00295 520 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 TEX28O15482 410 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 PJA2O43164 708 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 BEST1O76090 585 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 ABLIM3O94929 683 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 CYP1A2P05177 515 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 CNPP09543 421 aaKnown RBP11.63□□□□□ -0.55
TMEM260-208ENST00000555905 DNAJB1P25685 340 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 ELF1P32519 619 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 GABRB2P47870 512 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 RPL10AP62906 217 aaKnown RBP11.63□□□□□ -0.55
TMEM260-208ENST00000555905 ADCY1Q08828 1119 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 MGAT5BQ3V5L5 792 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 PTPN20Q4JDL3 420 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 CYP4A22Q5TCH4 519 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 TMEM110Q86TL2 294 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 PIGZQ86VD9 579 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 SCN4BQ8IWT1 228 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 REXO1L1PQ8IX06 675 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 SIX6OS1Q8N1H7 587 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 KCTD13Q8WZ19 329 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 C8orf48Q96LL4 319 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 CPXM1Q96SM3 734 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 KCNK16Q96T55 309 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 SEPT5Q99719 369 aaPredicted RBP11.63□□□□□ -0.55
TMEM260-208ENST00000555905 SLC4A5Q9BY07 1137 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 MFRPQ9BY79 579 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 LMAN2LQ9H0V9 348 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 PRO3102Q9H379 93 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 CERS4Q9HA82 394 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 LRRC4Q9HBW1 653 aa11.63□□□□□ -0.55
TMEM260-208ENST00000555905 MRPL47Q9HD33 250 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms