RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TMEM150AQ86TG1 271 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 SPATA2LQ8IUW3 424 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-215ENST00000555616 VSTM4Q8IW00 320 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 CCDC105Q8IYK2 499 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 GIPC2Q8TF65 315 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 MYLPFQ96A32 169 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 E2F7Q96AV8 911 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 IQCDQ96DY2 449 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 TRMT2BQ96GJ1 504 aaKnown RBP10.25□□□□□ -0.77
ACTN1-215ENST00000555616 SHDQ96IW2 340 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 MYRFLQ96LU7 910 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 GCNAQ96QF7 691 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 ERGIC2Q96RQ1 377 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 MMS19Q96T76 1030 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 ATXN3LQ9H3M9 355 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 SLITRK6Q9H5Y7 841 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 CRTAC1Q9NQ79 661 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 GCNT4Q9P109 453 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 ZMYM5Q9UJ78 669 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 NME7Q9Y5B8 376 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 MYO10Q9HD67 2058 aa10.25□□□□□ -0.77
ACTN1-215ENST00000555616 ARNTLO00327 626 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 ATP2C2O75185 946 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 TADA3O75528 432 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CSH1P0DML2 217 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CSH2P0DML3 217 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 PSMC3P17980 439 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CYP2F1P24903 491 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 VIPR2P41587 438 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CYP4F8P98187 520 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 FCHO2Q0JRZ9 810 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 TRIM14Q14142 442 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 GRM2Q14416 872 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 TAF12Q16514 161 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CBWD6Q4V339 395 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CBWD3Q5JTY5 395 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CBWD5Q5RIA9 395 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 GPR158Q5T848 1215 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 VSTM1Q6UX27 236 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 SV2AQ7L0J3 742 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CCDC150Q8NCX0 1101 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 FBXL13Q8NEE6 735 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 PJA1Q8NG27 643 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 MYCBPAPQ8TBZ2 947 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 TAF4BQ92750 862 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 RSPRY1Q96DX4 576 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 PCED1BQ96HM7 432 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 CEP295NLQ96MC4 621 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 NUP58Q9BVL2 599 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 TRMT61BQ9BVS5 477 aaKnown RBP10.24□□□□□ -0.77
ACTN1-215ENST00000555616 IMPG2Q9BZV3 1241 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 SNX25Q9H3E2 840 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 TASP1Q9H6P5 420 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 SMYD3Q9H7B4 428 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 TRPV5Q9NQA5 729 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 OBP2AQ9NY56 170 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 DLGAP2Q9P1A6 1054 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.24□□□□□ -0.774e-9■■□□□ 14.3
ACTN1-215ENST00000555616 ITIH6Q6UXX5 1313 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 COL4A3Q01955 1670 aa10.24□□□□□ -0.77
ACTN1-215ENST00000555616 SLC38A8A6NNN8 435 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 SOBPA7XYQ1 873 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 HEPACAM2A8MVW5 462 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 CLSTN1O94985 981 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 PRAMEF12O95522 483 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 ASS1P00966 412 aaKnown RBP10.23□□□□□ -0.77
ACTN1-215ENST00000555616 F11P03951 625 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 TRIM21P19474 475 aaKnown RBP10.23□□□□□ -0.77
ACTN1-215ENST00000555616 RFX1P22670 979 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 DDX6P26196 483 aaKnown RBP eCLIP10.23□□□□□ -0.77
ACTN1-215ENST00000555616 GNL1P36915 607 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-215ENST00000555616 PBX1P40424 430 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 PIK3CAP42336 1068 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 DDR2Q16832 855 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 SLC44A4Q53GD3 710 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 ZNF667Q5HYK9 610 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 SDHAF4Q5VUM1 108 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 TMC6Q7Z403 805 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 ARID3BQ8IVW6 561 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-215ENST00000555616 MFSD6LQ8IWD5 586 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 STKLD1Q8NE28 680 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 NEK11Q8NG66 645 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 OR6B3Q8NGW1 331 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 IRF7Q92985 503 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 SPATA17Q96L03 361 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 CRACR2AQ9BSW2 395 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 FOXQ1Q9C009 403 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 ELOVL4Q9GZR5 314 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 IRF2BPLQ9H1B7 796 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 DPEP3Q9H4B8 488 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 BRD9Q9H8M2 597 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 PLCB1Q9NQ66 1216 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 IMPACTQ9P2X3 320 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 UXTQ9UBK9 157 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-215ENST00000555616 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
ACTN1-215ENST00000555616 COQ4Q9Y3A0 265 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 DAAM1Q9Y4D1 1078 aa10.23□□□□□ -0.77
ACTN1-215ENST00000555616 NUP210Q8TEM1 1887 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-215ENST00000555616 KANSL1LA0AUZ9 987 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms