RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DCP1BQ8IZD4 617 aaKnown RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 ATAD1Q8NBU5 361 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 CLEC4CQ8WTT0 213 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 NDRG1Q92597 394 aaKnown RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 SLC4A5Q9BY07 1137 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 AVENQ9NQS1 362 aaPredicted RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 ABI2Q9NYB9 513 aaPredicted RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 MTUS1Q9ULD2 1270 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 PACSIN2Q9UNF0 486 aaPredicted RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 LINC01553A4QN01 128 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 OR6C75A6NL08 312 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 H7C4K7 107 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 PAPSS1O43252 624 aaPredicted RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 NCK2O43639 380 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 CASQ1P31415 396 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 PLA2G4AP47712 749 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 SLC8A3P57103 927 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 RNASE9P60153 205 aaKnown RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 MESDQ14696 234 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 TAF5Q15542 800 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 PSMD5Q16401 504 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 DNAJC24Q6P3W2 148 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 FAM183BPQ6ZVS7 135 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 GPRIN1Q7Z2K8 1008 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 DAAM2Q86T65 1068 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 DDX53Q86TM3 631 aaKnown RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 TTC9BQ8N6N2 239 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 LRRC57Q8N9N7 239 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 TRIM58Q8NG06 486 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 IPO4Q8TEX9 1081 aaKnown RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 STK32AQ8WU08 396 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 SMARCD1Q96GM5 515 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 MCEEQ96PE7 176 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 ALS2CR12Q96Q35 445 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 UBE2OQ9C0C9 1292 aaKnown RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 ALG13Q9NP73 1137 aaKnown RBP10.76□□□□□ -0.69
SRP54-208ENST00000555557 PARVAQ9NVD7 372 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 UVRAGQ9P2Y5 699 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 ANAPC7Q9UJX3 599 aa10.76□□□□□ -0.69
SRP54-208ENST00000555557 F8VP50 259 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 GRAP2O75791 330 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 SOAT2O75908 522 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 VNN2O95498 520 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 ATP1A1P05023 1023 aaKnown RBP10.75□□□□□ -0.69
SRP54-208ENST00000555557 OR1D2P34982 312 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 CTNNB1P35222 781 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 PPM1AP35813 382 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 GRIK1P39086 918 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 GLUD2P49448 558 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 GPR15P49685 360 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 DNA2P51530 1060 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 DSG1Q02413 1049 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 KRT17Q04695 432 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 ADIGQ0VDE8 80 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 ZNF268Q14587 947 aaPredicted RBP10.75□□□□□ -0.69
SRP54-208ENST00000555557 TCEAL1Q15170 157 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 FAM102AQ5T9C2 384 aaPredicted RBP10.75□□□□□ -0.69
SRP54-208ENST00000555557 SDHAF4Q5VUM1 108 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 C4orf50Q6ZRC1 276 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 EMC1Q8N766 993 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 MSANTD4Q8NCY6 345 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 C3orf20Q8ND61 904 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 STKLD1Q8NE28 680 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 JOSD2Q8TAC2 188 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 FEZF2Q8TBJ5 459 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 PIK3R5Q8WYR1 880 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 HSFY1Q96LI6 401 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 CLSTN3Q9BQT9 956 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 C17orf80Q9BSJ5 609 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 SELENOOQ9BVL4 669 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 CRISPLD1Q9H336 500 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 METTL5Q9NRN9 209 aaKnown RBP10.75□□□□□ -0.69
SRP54-208ENST00000555557 MTRRQ9UBK8 725 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 STRIP2Q9ULQ0 834 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 SLC27A5Q9Y2P5 690 aa10.75□□□□□ -0.69
SRP54-208ENST00000555557 WDR27A2RRH5 827 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 HHLA1C9JL84 531 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 H0YGN5 161 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 KIF2AO00139 706 aaPredicted RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 CA3P07451 260 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 KRT3P12035 628 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 CA8P35219 290 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 RFC1P35251 1148 aaPredicted RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 BMPR1AP36894 532 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 PBX2P40425 430 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 RPL34P49207 117 aaKnown RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 TERF1P54274 439 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 ROR1Q01973 937 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 OGDHQ02218 1023 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 GPR17Q13304 367 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 IFI16Q16666 785 aaKnown RBP10.74□□□□□ -0.69
SRP54-208ENST00000555557 DDR2Q16832 855 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 DAB2IPQ5VWQ8 1189 aa10.74□□□□□ -0.69
SRP54-208ENST00000555557 SLC8B1Q6J4K2 584 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms