RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 MS4A7Q9GZW8 240 aaPredicted RBP6.39□□□□□ -1.39
VRK1-205ENST00000555402 XPR1Q9UBH6 696 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 ZNF212Q9UDV6 495 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 CDYLQ9Y232 598 aa6.39□□□□□ -1.39
VRK1-205ENST00000555402 A0A087WWL8 130 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 CCDC189A1A4V9 331 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 MBD3L4A6NDZ8 208 aaPredicted RBP6.38□□□□□ -1.39
VRK1-205ENST00000555402 MBD3L3A6NE82 208 aaPredicted RBP6.38□□□□□ -1.39
VRK1-205ENST00000555402 IKBKBO14920 756 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 FFAR2O15552 330 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 PIP5K1CO60331 668 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 CFIP05156 583 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 FDXRP22570 491 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 KLRC1P26715 233 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 RAPGEF1Q13905 1077 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
VRK1-205ENST00000555402 MPEG1Q2M385 716 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 CCDC38Q502W7 563 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 NOMO2Q5JPE7 1267 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 FAM160B1Q5W0V3 765 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 GPR149Q86SP6 731 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 FANCBQ8NB91 859 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 NUP133Q8WUM0 1156 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 TRIM63Q969Q1 353 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 SPSB4Q96A44 273 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 Q96MF0 132 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 ZNF778Q96MU6 729 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 CHST8Q9H2A9 424 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 ZSCAN32Q9NX65 697 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 MAN2B2Q9Y2E5 1009 aa6.38□□□□□ -1.39
VRK1-205ENST00000555402 E9PLN8 166 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 POLRMTO00411 1230 aaKnown RBP6.37□□□□□ -1.39
VRK1-205ENST00000555402 MGST3O14880 152 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 CDKL5O76039 1030 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 PRSS23O95084 383 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 MYL4P12829 197 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 XRCC6P12956 609 aaKnown RBP eCLIP6.37□□□□□ -1.39
VRK1-205ENST00000555402 PIGFQ07326 219 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 TUBB8Q3ZCM7 444 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 TSHZ3Q63HK5 1081 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 FBXO38Q6PIJ6 1188 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 YAF2Q8IY57 180 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 CPXCR1Q8N123 301 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 CCDC150Q8NCX0 1101 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 MUL1Q969V5 352 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 LTV1Q96GA3 475 aaPredicted RBP6.37□□□□□ -1.39
VRK1-205ENST00000555402 MARS2Q96GW9 593 aaKnown RBP6.37□□□□□ -1.39
VRK1-205ENST00000555402 SMOQ99835 787 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 VKORC1Q9BQB6 163 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 TTLL2Q9BWV7 592 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 TLR10Q9BXR5 811 aa6.37□□□□□ -1.39
VRK1-205ENST00000555402 PLA2G6O60733 806 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 SKAP2O75563 359 aaPredicted RBP6.36□□□□□ -1.39
VRK1-205ENST00000555402 TXNP10599 105 aaKnown RBP6.36□□□□□ -1.39
VRK1-205ENST00000555402 FCER1AP12319 257 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 ALDH9A1P49189 494 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 CACNA2D1P54289 1103 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 SATB1Q01826 763 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 SRSF4Q08170 494 aaKnown RBP6.36□□□□□ -1.39
VRK1-205ENST00000555402 ZNF844Q08AG5 666 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 BLMHQ13867 455 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 SLC30A10Q6XR72 485 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 ZNF354CQ86Y25 554 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 SMAP1Q8IYB5 467 aaPredicted RBP6.36□□□□□ -1.39
VRK1-205ENST00000555402 MYCT1Q8N699 235 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 SPATA5Q8NB90 893 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 NSUN7Q8NE18 718 aaKnown RBP6.36□□□□□ -1.39
VRK1-205ENST00000555402 MOGAT1Q96PD6 335 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 NEU1Q99519 415 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 EIF2AQ9BY44 585 aaKnown RBP6.36□□□□□ -1.39
VRK1-205ENST00000555402 TTYH3Q9C0H2 523 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 MID2Q9UJV3 735 aa6.36□□□□□ -1.39
VRK1-205ENST00000555402 CGB1A6NKQ9 187 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 RAB27BO00194 218 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 PROP1O75360 226 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 IL1R1P14778 569 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 GCSHP23434 173 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 IL1R2P27930 398 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 SLFN5Q08AF3 891 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 SLC29A2Q14542 456 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 KRTAP5-11Q6L8G4 156 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 Q6ZNX1 250 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 CATSPERGQ6ZRH7 1159 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 CFAP52Q8N1V2 620 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 TRIB1Q96RU8 372 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 PPP1R9BQ96SB3 815 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 PNKPQ96T60 521 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 HEPHQ9BQS7 1158 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 MAGEB5Q9BZ81 275 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 MRPS18AQ9NVS2 196 aaKnown RBP6.35□□□□□ -1.39
VRK1-205ENST00000555402 FOXJ2Q9P0K8 574 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 SLC39A10Q9ULF5 831 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 TBC1D30Q9Y2I9 924 aa6.35□□□□□ -1.39
VRK1-205ENST00000555402 PODXLO00592 558 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 HNRNPDLO14979 420 aaKnown RBP6.34□□□□□ -1.39
VRK1-205ENST00000555402 AREL1O15033 823 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 INMTO95050 263 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 CYP2C9P11712 490 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 CHRM3P20309 590 aa6.34□□□□□ -1.39
VRK1-205ENST00000555402 PAX3P23760 479 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms