RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLC8A3P57103 927 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 GRM2Q14416 872 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 STX1AQ16623 288 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 BMP8AQ7Z5Y6 402 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.36
SRP54-206ENST00000555317 CMTM8Q8IZV2 173 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 FUKQ8N0W3 1084 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 NUP93Q8N1F7 819 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 FBXL6Q8N531 539 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 MAB21L3Q8N8X9 362 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 FLCNQ8NFG4 579 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 TATDN2Q93075 761 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 CYFIP2Q96F07 1278 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 SHDQ96IW2 340 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 TWNKQ96RR1 684 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 GCNT4Q9P109 453 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 MUC6Q6W4X9 2439 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 ZNF263O14978 683 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 ABL1P00519 1130 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 YWHAQP27348 245 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 GDI1P31150 447 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 MAP3K7CLP57077 242 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 GPC5P78333 572 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 TXNDC8Q6A555 127 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 VITQ6UXI7 678 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 MON1AQ86VX9 555 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 MFSD6LQ8IWD5 586 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 CELF5Q8N6W0 485 aaKnown RBP12.82□□□□□ -0.36
SRP54-206ENST00000555317 TTC16Q8NEE8 873 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 PDZD8Q8NEN9 1154 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 IRF7Q92985 503 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 FBXO32Q969P5 355 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 HNRNPABQ99729 332 aaKnown RBP12.82□□□□□ -0.36
SRP54-206ENST00000555317 INTS2Q9H0H0 1204 aaKnown RBP12.82□□□□□ -0.36
SRP54-206ENST00000555317 THG1LQ9NWX6 298 aaKnown RBP12.82□□□□□ -0.36
SRP54-206ENST00000555317 OBP2AQ9NY56 170 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 F5P12259 2224 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 MYO16Q9Y6X6 1858 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 ZNF318Q5VUA4 2279 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 ANAPC1Q9H1A4 1944 aa12.82□□□□□ -0.36
SRP54-206ENST00000555317 TPM2P07951 284 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 USP17L7P0C7H9 530 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 PRKCSHP14314 528 aaPredicted RBP12.81□□□□□ -0.36
SRP54-206ENST00000555317 CD19P15391 556 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 PTMSP20962 102 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 KCNA4P22459 653 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 WEE1P30291 646 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 SLC5A3P53794 718 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 CACNA2D1P54289 1103 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 USP46P62068 366 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 TAF10Q12962 218 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 SGO2Q562F6 1265 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 CC2D1AQ6P1N0 951 aaPredicted RBP12.81□□□□□ -0.36
SRP54-206ENST00000555317 GBP6Q6ZN66 633 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 RBM43Q6ZSC3 357 aaKnown RBP12.81□□□□□ -0.36
SRP54-206ENST00000555317 TMEM150AQ86TG1 271 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 GPIHBP1Q8IV16 184 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 SLC4A11Q8NBS3 891 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 EHBP1Q8NDI1 1231 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 CSGALNACT1Q8TDX6 532 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 WHAMMQ8TF30 809 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 DNASE1L2Q92874 299 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 KCNK16Q96T55 309 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 TTLL2Q9BWV7 592 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 SLC46A2Q9BY10 475 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 PLA2G2FQ9BZM2 168 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 SMG9Q9H0W8 520 aaKnown RBP12.81□□□□□ -0.36
SRP54-206ENST00000555317 FBXO44Q9H4M3 255 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 HESX1Q9UBX0 185 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
SRP54-206ENST00000555317 KCNJ18B7U540 433 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 TADA3O75528 432 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PRAMEF12O95522 483 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PDGFBP01127 241 aaPredicted RBP12.8□□□□□ -0.36
SRP54-206ENST00000555317 NPR3P17342 541 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PFKLP17858 780 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 COL9A1P20849 921 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 RAD23BP54727 409 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 GCNT1Q02742 428 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PRKCQQ04759 706 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 KCNJ12Q14500 433 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 MLF2Q15773 248 aaPredicted RBP12.8□□□□□ -0.36
SRP54-206ENST00000555317 MAN2A1Q16706 1144 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 ARHGAP29Q52LW3 1261 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 SLC44A4Q53GD3 710 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 HSP90AA4PQ58FG1 418 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PPP1R26Q5T8A7 1209 aaPredicted RBP12.8□□□□□ -0.36
SRP54-206ENST00000555317 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
SRP54-206ENST00000555317 POTEHQ6S545 545 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PAQR9Q6ZVX9 377 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 RRAGAQ7L523 313 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 ANKRD20A12PQ8NF67 263 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms