RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CFAP69A5D8W1 941 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 CIB2O75838 187 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 OATP04181 439 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 DHRS4L1P0CG22 281 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 KRT4P19013 534 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PTPN7P35236 360 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 SOX10P56693 466 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 MAPK6Q16659 721 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 CNPY1Q3B7I2 92 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 MTERF2Q49AM1 385 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 LIN52Q52LA3 116 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 LCA5Q86VQ0 697 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 ALLCQ8N6M5 410 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 PWWP2AQ96N64 755 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 WRNIP1Q96S55 665 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 CGRRF1Q99675 332 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 NIFKQ9BYG3 293 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 VPS37BQ9H9H4 285 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 ZNF302Q9NR11 478 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 CHORDC1Q9UHD1 332 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 SCAF8Q9UPN6 1271 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 CNTN6Q9UQ52 1028 aa11.2□□□□□ -0.62
MTHFD1-210ENST00000555252 LTBP3Q9NS15 1303 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 K7ERI5 159 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 LIASO43766 372 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 EGFRP00533 1210 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 PABPC4LP0CB38 370 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 ARL2P36404 184 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 PGM1P36871 562 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 VPS41P49754 854 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 ZBTB16Q05516 673 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 LSAMPQ13449 338 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 CUL2Q13617 745 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 PABPC1LQ4VXU2 614 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 SH2D4BQ5SQS7 431 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 ACAD11Q709F0 780 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 MARK2Q7KZI7 788 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 MON1BQ7L1V2 547 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 MYLK4Q86YV6 388 aaPredicted RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 TRIM42Q8IWZ5 723 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 RCOR2Q8IZ40 523 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 BANPQ8N9N5 519 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 ATP11CQ8NB49 1132 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 NDNQ99608 321 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 ECSITQ9BQ95 431 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 HERPUD2Q9BSE4 406 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 PI4K2AQ9BTU6 479 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 MAK16Q9BXY0 300 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 C1orf21Q9H246 121 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 DHX33Q9H6R0 707 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 CHCHD3Q9NX63 227 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 CIDEBQ9UHD4 219 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 PPP2R3BQ9Y5P8 575 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 GMEB1Q9Y692 573 aa11.19□□□□□ -0.62
MTHFD1-210ENST00000555252 SMIM31A0A1B0GVY4 71 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 FAM170AA1A519 330 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 IRF6O14896 467 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 FAM155BO75949 473 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 FGFR1P11362 822 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 ACO1P21399 889 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 HMGCS2P54868 508 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 C1QBPQ07021 282 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 GRM1Q13255 1194 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 PRKD1Q15139 912 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 RNASEH2BQ5TBB1 312 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 TDRD10Q5VZ19 366 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 KYAT3Q6YP21 454 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 PHF13Q86YI8 300 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 ABRAQ8N0Z2 381 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 RFWD2Q8NHY2 731 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 MZB1Q8WU39 189 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 SLC7A3Q8WY07 619 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 TMEM120AQ9BXJ8 343 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 FRMD8P1Q9BZ68 369 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 ACSS3Q9H6R3 686 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 PCDH9Q9HC56 1237 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 NRBP2Q9NSY0 501 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 NDE1Q9NXR1 346 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 KCNK4Q9NYG8 393 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 RBAKQ9NYW8 714 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 SCN4AP35499 1836 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 RLFQ13129 1914 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 NFKBIEO00221 500 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 TM7SF2O76062 418 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 DLDP09622 509 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 ANPEPP15144 967 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 ADRA1DP25100 572 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 NLRP11P59045 1033 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 ACTR3P61158 418 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 THOC5Q13769 683 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 ITGA9Q13797 1035 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 LRRC38Q5VT99 294 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 RINLQ6ZS11 566 aa11.18□□□□□ -0.62
MTHFD1-210ENST00000555252 PRUNE1Q86TP1 453 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms