RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NSFP46459 744 aaKnown RBP11.38□□□□□ -0.59
TDP1-211ENST00000555178 MAP3K7CLP57077 242 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 KIF5AQ12840 1032 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 PTP4A2Q12974 167 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 PTPROQ16827 1216 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 DDR2Q16832 855 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 ANKS3Q6ZW76 656 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 ZNF653Q96CK0 615 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 TNIP3Q96KP6 325 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 WDR24Q96S15 920 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 CPXM1Q96SM3 734 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 HNRNPABQ99729 332 aaKnown RBP11.38□□□□□ -0.59
TDP1-211ENST00000555178 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 KRT82Q9NSB4 513 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 NOTCH4Q99466 2003 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 BRWD1Q9NSI6 2320 aa11.38□□□□□ -0.59
TDP1-211ENST00000555178 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 HHLA1C9JL84 531 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 FSCN2O14926 492 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 URODP06132 367 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 PCSK1P29120 753 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 CDH5P33151 784 aaPredicted RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 PGFP49763 221 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 NDUFV1P49821 464 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 ADCY1Q08828 1119 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 DUSP4Q13115 394 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 PDCLQ13371 301 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 RBM23Q86U06 439 aaKnown RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 MCOLN2Q8IZK6 566 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 CLEC4CQ8WTT0 213 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 KLHL5Q96PQ7 755 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 PLVAPQ9BX97 442 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 ENTPD7Q9NQZ7 604 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 TLR9Q9NR96 1032 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 MRPL17Q9NRX2 175 aaKnown RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 OBSL1O75147 1896 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 C2orf16Q68DN1 1984 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 ANAPC1Q9H1A4 1944 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 ANKRD62A6NC57 917 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 LSM8O95777 96 aaKnown RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 ERBB2P04626 1255 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 PAX3P23760 479 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 SMAD3P84022 425 aaKnown RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 GPR17Q13304 367 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 RAB30Q15771 203 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 TRIM72Q6ZMU5 477 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 MRPL43Q8N983 215 aaKnown RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 TMEM35BQ8NCS4 154 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 SLC35F5Q8WV83 523 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 CTNNBL1Q8WYA6 563 aaPredicted RBP11.37□□□□□ -0.59
TDP1-211ENST00000555178 BTBD6Q96KE9 485 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 FAM161BQ96MY7 647 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 LHX5Q9H2C1 402 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 RXFP1Q9HBX9 757 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 ST7Q9NRC1 585 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 ADAM22Q9P0K1 906 aa11.37□□□□□ -0.59
TDP1-211ENST00000555178 NCANO14594 1321 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 DENND4CQ5VZ89 1909 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 OR6C75A6NL08 312 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 F8VP50 259 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 NRG2O14511 850 aaPredicted RBP11.36□□□□□ -0.59
TDP1-211ENST00000555178 CCP110O43303 1012 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 KRT86O43790 486 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 AP1G2O75843 785 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 ABLIM3O94929 683 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 MMP8P22894 467 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 TSPY1Q01534 308 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 MTMR3Q13615 1198 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 C10orf76Q5T2E6 689 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 SYT10Q6XYQ8 523 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 PHF13Q86YI8 300 aaPredicted RBP11.36□□□□□ -0.59
TDP1-211ENST00000555178 CPNE8Q86YQ8 564 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 ANKRD52Q8NB46 1076 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 SCAMP5Q8TAC9 235 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 SLC35G2Q8TBE7 412 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 SPATA18Q8TC71 538 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 MICAL1Q8TDZ2 1067 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 C11orf84Q9BUA3 381 aaPredicted RBP11.36□□□□□ -0.59
TDP1-211ENST00000555178 DUSP16Q9BY84 665 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 CNOT8Q9UFF9 292 aaKnown RBP11.36□□□□□ -0.59
TDP1-211ENST00000555178 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 E5RJQ4 531 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 H7C4K7 107 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 TGM5O43548 720 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 RB1P06400 928 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 ATF6P18850 670 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
TDP1-211ENST00000555178 GNG11P61952 73 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 USP46P62068 366 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 GRIN2CQ14957 1233 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 TAF5Q15542 800 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 ZNF569Q5MCW4 686 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 ZNF662Q6ZS27 426 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 PIGZQ86VD9 579 aa11.36□□□□□ -0.59
TDP1-211ENST00000555178 SPATA2LQ8IUW3 424 aaPredicted RBP11.36□□□□□ -0.59
TDP1-211ENST00000555178 SCN4BQ8IWT1 228 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms