RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 KIAA1257Q9ULG3 409 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 TSPAN1O60635 241 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 KRT3P12035 628 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 MYO1EQ12965 1108 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 TFDP1Q14186 410 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 TAF5Q15542 800 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 ZBTB33Q86T24 672 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 CFAP61Q8NHU2 1237 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 STK32AQ8WU08 396 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 NSRP1Q9H0G5 558 aaKnown RBP13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 ADAMTS10Q9H324 1103 aa13.22□□□□□ -0.29
PPP4R3A-206ENST00000554943 CHUKO15111 745 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 STAG3L1P0CL83 205 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 MIPP30301 263 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 CCNFP41002 786 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 RAP1GAPP47736 663 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 GPS1Q13098 491 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 SLC1A5Q15758 541 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 CYS1Q717R9 158 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 CHSY1Q86X52 802 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 PLD5Q8N7P1 536 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 ANKRD36BP1Q96IX9 119 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 CCDC114Q96M63 670 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 BCLAF3A2AJT9 711 aaKnown RBP13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 CHADO15335 359 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 GEMIN4P57678 1058 aaKnown RBP13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 RAB6CQ53S08 254 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 EFCAB12Q6NXP0 572 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 SLC35F5Q8WV83 523 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 TGS1Q96RS0 853 aaKnown RBP13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 RAB6CQ9H0N0 254 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 SAYSD1Q9NPB0 183 aa13.21□□□□□ -0.29
PPP4R3A-206ENST00000554943 KLF11O14901 512 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 MDM4O15151 490 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 PRKCHP24723 683 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 RPA3P35244 121 aaPredicted RBP13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 CTCFP49711 727 aaPredicted RBP13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 TNFAIP2Q03169 654 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 LRRC14Q15048 493 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 PARP6Q2NL67 630 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 CCDC25Q86WR0 208 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 C7orf31Q8N865 590 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 PSMC3IPQ9P2W1 217 aaPredicted RBP13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 BARX2Q9UMQ3 279 aaPredicted RBP13.21□□□□□ -0.3
PPP4R3A-206ENST00000554943 NPTXRO95502 500 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 NQO1P15559 274 aaKnown RBP13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 GRM5P41594 1212 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 ADAM17P78536 824 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 IRF5Q13568 498 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 TRAPPC12Q8WVT3 735 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 COPS5Q92905 334 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 LRMDAQ9H2I8 198 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 KCNK13Q9HB14 408 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 MTMR10Q9NXD2 777 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 CHKBQ9Y259 395 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 A0A1W2PPM1 405 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 DNAJC6O75061 913 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 UNC5CO95185 931 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 ARF4P18085 180 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 HOXC8P31273 242 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 PLEKHG4Q58EX7 1191 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 CENPUQ71F23 418 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 TTC39CQ8N584 583 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 METTL5Q9NRN9 209 aaKnown RBP13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 KLHL14Q9P2G3 628 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 LNPEPQ9UIQ6 1025 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 GOLGA6L7A0A1B0GV03 622 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 ADM5C9JUS6 153 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 TM9SF1O15321 606 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 TNNC2P02585 160 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 LGALS2P05162 132 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 PGK2P07205 417 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 CDH8P55286 799 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 MTHFD1LQ6UB35 978 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 RHPN2Q8IUC4 686 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 RSAD1Q9HA92 442 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 PLEKHA5Q9HAU0 1116 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 ERAP1Q9NZ08 941 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
PPP4R3A-206ENST00000554943 GPR32O75388 356 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 ZWINTO95229 277 aa13.19□□□□□ -0.3
PPP4R3A-206ENST00000554943 PSMA2P25787 234 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms