RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RNF214Q8ND24 703 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 LEO1Q8WVC0 666 aaPredicted RBP9.46□□□□□ -0.9
TDP1-208ENST00000553989 OSCP1Q8WVF1 389 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 CD101Q93033 1021 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 CHFRQ96EP1 664 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ZNF396Q96N95 335 aaPredicted RBP9.46□□□□□ -0.9
TDP1-208ENST00000553989 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 MTMR12Q9C0I1 747 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 PCIF1Q9H4Z3 704 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ABCB6Q9NP58 842 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 RXFP3Q9NSD7 469 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 POLR3BQ9NW08 1133 aaPredicted RBP9.46□□□□□ -0.9
TDP1-208ENST00000553989 ANGPTL2Q9UKU9 493 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ITGA11Q9UKX5 1188 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 PCDHGA5Q9Y5G8 931 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 WNT6Q9Y6F9 365 aa9.46□□□□□ -0.9
TDP1-208ENST00000553989 ZNF638Q14966 1978 aaKnown RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 MYMKA6NI61 221 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 SOBPA7XYQ1 873 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 TADA3O75528 432 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 AKAP3O75969 853 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 NOL4O94818 638 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 RHOBTB1O94844 696 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 CLSTN1O94985 981 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 GARTP22102 1010 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 ANXA13P27216 316 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 STAT6P42226 847 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 RAP1GAPP47736 663 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 LHX1P48742 406 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 PDE6CP51160 858 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 DGKEP52429 567 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 LIMK1P53667 647 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 SEC13P55735 322 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 WNT7BP56706 349 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 PSMC1P62191 440 aaKnown RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 CEBPZQ03701 1054 aaKnown RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 DMC1Q14565 340 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 PLK5Q496M5 336 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 LMBRD2Q68DH5 695 aaPredicted RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 NAIF1Q69YI7 327 aaPredicted RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 C4orf50Q6ZRC1 276 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 USP49Q70CQ1 688 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 TTC30AQ86WT1 665 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 TOP6BLQ8N6T0 577 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 ARL14EPQ8N8R7 260 aaPredicted RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 ZSWIM2Q8NEG5 633 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 TSTD1Q8NFU3 115 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 CCDC26Q8TAB7 109 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 RIN3Q8TB24 985 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 TRMT2BQ96GJ1 504 aaKnown RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 ANKRD36BP1Q96IX9 119 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 FAM84AQ96KN4 292 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 SPATA32Q96LK8 384 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 CYP2S1Q96SQ9 504 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 SYT15Q9BQS2 421 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 CBWD1Q9BRT8 395 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 EDEM2Q9BV94 578 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 NUP62CLQ9H1M0 184 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 TMEM206Q9H813 350 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 FBRSL1Q9HCM7 1045 aaKnown RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 VPS45Q9NRW7 570 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
TDP1-208ENST00000553989 CLIC4Q9Y696 253 aa9.45□□□□□ -0.9
TDP1-208ENST00000553989 SDK1Q7Z5N4 2213 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 C2orf78A6NCI8 922 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 DCLK1O15075 740 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 MAP3K7O43318 606 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 HCRTO43612 131 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 NFATC1O95644 943 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 ABL1P00519 1130 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 TNNC2P02585 160 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 HDCP19113 662 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 GRIK1P39086 918 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 CASP5P51878 434 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 CYP27A1Q02318 531 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 USP4Q13107 963 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 ALCAMQ13740 583 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 ZNF77Q15935 545 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 CCDC142Q17RM4 750 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
TDP1-208ENST00000553989 CFAP221Q4G0U5 840 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 N4BP2L1Q5TBK1 243 aaPredicted RBP9.44□□□□□ -0.9
TDP1-208ENST00000553989 TCEAL6Q6IPX3 200 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
TDP1-208ENST00000553989 CCDC73Q6ZRK6 1079 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 SYT13Q7L8C5 426 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 OSTM1Q86WC4 334 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 SH3RF2Q8TEC5 729 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 TCEAL3Q969E4 200 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 MYLPFQ96A32 169 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 FUBP3Q96I24 572 aaKnown RBP eCLIP9.44□□□□□ -0.9
TDP1-208ENST00000553989 CLIC6Q96NY7 704 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 SLC22A12Q96S37 553 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 MMS19Q96T76 1030 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 TPSD1Q9BZJ3 242 aa9.44□□□□□ -0.9
TDP1-208ENST00000553989 PDE11AQ9HCR9 933 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms