RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PIGZQ86VD9 579 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 XYLT1Q86Y38 959 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 GPR65Q8IYL9 337 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 VPS52Q8N1B4 723 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 SLC35F6Q8N357 371 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 ZNF564Q8TBZ8 553 aaPredicted RBP12.4□□□□□ -0.42
NEK9-202ENST00000553823 FUBP3Q96I24 572 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEK9-202ENST00000553823 WDR24Q96S15 920 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 SMOQ99835 787 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 UBE2OQ9C0C9 1292 aaKnown RBP12.4□□□□□ -0.42
NEK9-202ENST00000553823 RRAGDQ9NQL2 400 aaPredicted RBP12.4□□□□□ -0.42
NEK9-202ENST00000553823 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 CHORDC1Q9UHD1 332 aaPredicted RBP12.4□□□□□ -0.42
NEK9-202ENST00000553823 COG5Q9UP83 839 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 PCDHB5Q9Y5E4 795 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 PCDHGC5Q9Y5F6 944 aa12.4□□□□□ -0.42
NEK9-202ENST00000553823 PATJQ8NI35 1801 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 TCRBV5S1A1TA0A578 114 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 GRID2IPA4D2P6 1211 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 E5RJQ4 531 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 C2CD2LO14523 706 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 BEST1O76090 585 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 CTNNB1P35222 781 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 BMPR1AP36894 532 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 CLCN6P51797 869 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 ARPP19P56211 112 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 TAP1Q03518 808 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 GPR17Q13304 367 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 CFAP221Q4G0U5 840 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 DNTTIP2Q5QJE6 756 aaKnown RBP12.39□□□□□ -0.43
NEK9-202ENST00000553823 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 RSPO2Q6UXX9 243 aaPredicted RBP12.39□□□□□ -0.43
NEK9-202ENST00000553823 KLHL23Q8NBE8 558 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 MCRS1Q96EZ8 462 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 GDF15Q99988 308 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 RHOBTB2Q9BYZ6 727 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 UBXN6Q9BZV1 441 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 LRRC4Q9HBW1 653 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 CSNK1G1Q9HCP0 422 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 ABCB6Q9NP58 842 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 DMAP1Q9NPF5 467 aaPredicted RBP12.39□□□□□ -0.43
NEK9-202ENST00000553823 ABI2Q9NYB9 513 aaPredicted RBP12.39□□□□□ -0.43
NEK9-202ENST00000553823 DNAI1Q9UI46 699 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 CDY1Q9Y6F8 540 aa12.39□□□□□ -0.43
NEK9-202ENST00000553823 ZNF638Q14966 1978 aaKnown RBP12.38□□□□□ -0.43
NEK9-202ENST00000553823 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 GRXCR1A8MXD5 290 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 GOLGA8SH3BPF8 625 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 PIK3R2O00459 728 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 BUB1BO60566 1050 aaPredicted RBP12.38□□□□□ -0.43
NEK9-202ENST00000553823 PALMO75781 387 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 LCP1P13796 627 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 CASQ1P31415 396 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 OR1D2P34982 312 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 MAGEA11P43364 429 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 CACNA2D1P54289 1103 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 FAM109BQ6ICB4 259 aaPredicted RBP12.38□□□□□ -0.43
NEK9-202ENST00000553823 OR6B2Q6IFH4 312 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 DCUN1D2Q6PH85 259 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 VSTM1Q6UX27 236 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 FAM183BPQ6ZVS7 135 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 ZDHHC17Q8IUH5 632 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 SYCE1Q8N0S2 351 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 ZMIZ2Q8NF64 920 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 FEZF2Q8TBJ5 459 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 SPPL2BQ8TCT7 592 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 C2orf15Q8WU43 125 aaKnown RBP12.38□□□□□ -0.43
NEK9-202ENST00000553823 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 KCNK16Q96T55 309 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 SELENOOQ9BVL4 669 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 ZBP1Q9H171 429 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEK9-202ENST00000553823 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
NEK9-202ENST00000553823 TMEM30AQ9NV96 361 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 ANAPC7Q9UJX3 599 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 LZTS1Q9Y250 596 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 PCDHA11Q9Y5I1 949 aa12.38□□□□□ -0.43
NEK9-202ENST00000553823 GREB1Q4ZG55 1949 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 MTMR11A4FU01 709 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 CTAGE9A4FU28 777 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 HHLA1C9JL84 531 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 F8VP50 259 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 H0YGN5 161 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 MYO1FO00160 1098 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 ADAM12O43184 909 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 PAPSS1O43252 624 aaPredicted RBP12.37□□□□□ -0.43
NEK9-202ENST00000553823 RB1P06400 928 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 CTSAP10619 480 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 KRT3P12035 628 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 MYOGP15173 224 aa12.37□□□□□ -0.43
NEK9-202ENST00000553823 RPL17P18621 184 aaKnown RBP12.37□□□□□ -0.43
NEK9-202ENST00000553823 CYP2F1P24903 491 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms