RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 USP1O94782 785 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 CYP2D6P10635 497 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 EN2P19622 333 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-210ENST00000553693 CTGFP29279 349 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 SLC13A2Q13183 592 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 PLA1AQ53H76 456 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 CERCAMQ5T4B2 595 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 ZNF425Q6IV72 752 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 CXorf57Q6NSI4 855 aaKnown RBP4.95□□□□□ -1.62
SCFD1-210ENST00000553693 KIRREL2Q6UWL6 708 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 ZNF280BQ86YH2 543 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 IZUMO1Q8IYV9 350 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 ABRAQ8N0Z2 381 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 MPP5Q8N3R9 675 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 PNLDC1Q8NA58 520 aaKnown RBP4.95□□□□□ -1.62
SCFD1-210ENST00000553693 BPIFB1Q8TDL5 484 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 RPL36ALQ969Q0 106 aaKnown RBP4.95□□□□□ -1.62
SCFD1-210ENST00000553693 RSPRY1Q96DX4 576 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 SUCLG2Q96I99 432 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 ASB2Q96Q27 587 aa4.95□□□□□ -1.62
SCFD1-210ENST00000553693 ZMAT3Q9HA38 289 aaKnown RBP4.95□□□□□ -1.62
SCFD1-210ENST00000553693 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-210ENST00000553693 FAM227AF5H4B4 570 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 UBE2Q2LH0YL09 131 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 PSMD9O00233 223 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 TUSC2O75896 110 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 CHRM5P08912 532 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-210ENST00000553693 NHLRC4P0CG21 123 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-210ENST00000553693 KITP10721 976 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 ADORA2AP29274 412 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 SLC7A1P30825 629 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 PTGER1P34995 402 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 CTBP1Q13363 440 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 ZIK1Q3SY52 487 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-210ENST00000553693 ODR4Q5SWX8 454 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 SLC18B1Q6NT16 456 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 EPM2AIP1Q7L775 607 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-210ENST00000553693 CAND1Q86VP6 1230 aaKnown RBP4.94□□□□□ -1.62
SCFD1-210ENST00000553693 SPARTQ8N0X7 666 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 NT5C1BQ96P26 610 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 SNX18Q96RF0 628 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 MACROD1Q9BQ69 325 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 THAP7Q9BT49 309 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-210ENST00000553693 B3GNT5Q9BYG0 378 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 ZNF518BQ9C0D4 1074 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 TFCP2L1Q9NZI6 479 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 SNX14Q9Y5W7 946 aa4.94□□□□□ -1.62
SCFD1-210ENST00000553693 CAPN8A6NHC0 703 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 POC1B-GALNT4F8VUJ3 575 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 ADAMTS3O15072 1205 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 CTNND1O60716 968 aaKnown RBP4.93□□□□□ -1.62
SCFD1-210ENST00000553693 MYCLP12524 364 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-210ENST00000553693 MPGP29372 298 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 MLC1Q15049 377 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 L1TD1Q5T7N2 865 aaKnown RBP4.93□□□□□ -1.62
SCFD1-210ENST00000553693 SLC9A4Q6AI14 798 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 NPNTQ6UXI9 565 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 CATSPERGQ6ZRH7 1159 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 CHSY1Q86X52 802 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 GALNT16Q8N428 558 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 GALNT4Q8N4A0 578 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 TERB1Q8NA31 727 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 IL31RAQ8NI17 732 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 DENND1AQ8TEH3 1009 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 RAPGEF4Q8WZA2 1011 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 CIPCQ9C0C6 399 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 TMEM60Q9H2L4 133 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 BHMT2Q9H2M3 363 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 ANLNQ9NQW6 1124 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 BTBD3Q9Y2F9 522 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 TBC1D30Q9Y2I9 924 aa4.93□□□□□ -1.62
SCFD1-210ENST00000553693 M0R3H8 397 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 EXOC3O60645 756 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 PRKAR1BP31321 381 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 MTHFSP49914 203 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 SUMO2P61956 95 aaKnown RBP4.92□□□□□ -1.62
SCFD1-210ENST00000553693 E2F1Q01094 437 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 KLF9Q13886 244 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-210ENST00000553693 CCNIQ14094 377 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 CYP1B1Q16678 543 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 INSCQ1MX18 579 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 DENND2CQ68D51 928 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 FCRL6Q6DN72 434 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 SERPINA13PQ6UXR4 307 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 MAEAQ7L5Y9 396 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 OVCH2Q7RTZ1 564 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 RAB11FIP4Q86YS3 637 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 SFTPA1Q8IWL2 248 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 SIRT6Q8N6T7 355 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 C8orf58Q8NAV2 365 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 PPP2R3CQ969Q6 453 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 RUNDC1Q96C34 613 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 RITA1Q96K30 269 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 LENG8Q96PV6 779 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-210ENST00000553693 FYTTD1Q96QD9 318 aaKnown RBP4.92□□□□□ -1.62
SCFD1-210ENST00000553693 PPP1R9BQ96SB3 815 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 C17orf80Q9BSJ5 609 aa4.92□□□□□ -1.62
SCFD1-210ENST00000553693 A1CFQ9NQ94 594 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms