RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 LIN9Q5TKA1 542 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 SDHAF4Q5VUM1 108 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 SLC8B1Q6J4K2 584 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 PPP1R2P3Q6NXS1 205 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 PMF1Q6P1K2 205 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 CLEC20AQ6ZU45 233 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 SPATA31D4Q6ZUB0 917 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 PIGZQ86VD9 579 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 SIX6OS1Q8N1H7 587 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 TXLNBQ8N3L3 684 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 WDTC1Q8N5D0 677 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 SPPL2BQ8TCT7 592 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 C2orf15Q8WU43 125 aaKnown RBP10.31□□□□□ -0.76
CHD8-204ENST00000553622 CTNNBL1Q8WYA6 563 aaPredicted RBP10.31□□□□□ -0.76
CHD8-204ENST00000553622 CPXM1Q96SM3 734 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 SMOQ99835 787 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 MIS12Q9H081 205 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 CYP4F11Q9HBI6 524 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 LRRC4Q9HBW1 653 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 NGRNQ9NPE2 291 aaKnown RBP10.31□□□□□ -0.76
CHD8-204ENST00000553622 LZTFL1Q9NQ48 299 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 FNIP2Q9P278 1114 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 CYTH4Q9UIA0 394 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 ZKSCAN5Q9Y2L8 839 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 OBSL1O75147 1896 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 ANAPC1Q9H1A4 1944 aa10.31□□□□□ -0.76
CHD8-204ENST00000553622 LAMA2P24043 3122 aaKnown RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 A0A0U1RQJ8 604 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 E5RJQ4 531 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 TRIM66O15016 1216 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 CCP110O43303 1012 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 ERBB2P04626 1255 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 CALB1P05937 261 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 MSNP26038 577 aaKnown RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 CDH5P33151 784 aaPredicted RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 NOP2P46087 812 aaKnown RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 GPR15P49685 360 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 VAV2P52735 878 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 SNX16P57768 344 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 ADIGQ0VDE8 80 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 SMARCB1Q12824 385 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 KIF5AQ12840 1032 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 RAB33AQ14088 237 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 DDR2Q16832 855 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 PTPN20Q4JDL3 420 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 ARHGAP29Q52LW3 1261 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 TPGS2Q68CL5 300 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 OR6B2Q6IFH4 312 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 LLGL2Q6P1M3 1020 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 MON1BQ7L1V2 547 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 RBM23Q86U06 439 aaKnown RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 MCOLN2Q8IZK6 566 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 MRPL43Q8N983 215 aaKnown RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 STKLD1Q8NE28 680 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 ZNF461Q8TAF7 563 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 GPR152Q8TDT2 470 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 SLC35F5Q8WV83 523 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 ATRIPQ8WXE1 791 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 C18orf8Q96DM3 657 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 TRIM11Q96F44 468 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 FUBP3Q96I24 572 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHD8-204ENST00000553622 KLHL5Q96PQ7 755 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 THAP2Q9H0W7 228 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 ISCUQ9H1K1 167 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 PRO3102Q9H379 93 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 RXFP1Q9HBX9 757 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 ABCB6Q9NP58 842 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 TMEM30AQ9NV96 361 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 TJP2Q9UDY2 1190 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 TRIM10Q9UDY6 481 aa10.3□□□□□ -0.76
CHD8-204ENST00000553622 CNOT8Q9UFF9 292 aaKnown RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 AFF4Q9UHB7 1163 aaKnown RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 CHORDC1Q9UHD1 332 aaPredicted RBP10.3□□□□□ -0.76
CHD8-204ENST00000553622 C2orf16Q68DN1 1984 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 ANKRD62A6NC57 917 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 RCCD1A6NED2 376 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 USP27XA6NNY8 438 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 FSCN2O14926 492 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 PER2O15055 1255 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 TGM5O43548 720 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 LILRB3O75022 631 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 SEC24AO95486 1093 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 VNN2O95498 520 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 GLUD1P00367 558 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 TMEM253P0C7T8 217 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 MYBL1P10243 752 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 HAPLN1P10915 354 aaPredicted RBP10.29□□□□□ -0.76
CHD8-204ENST00000553622 MMP8P22894 467 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 RRM1P23921 792 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 MAGEA11P43364 429 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 ACADSBP45954 432 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 PLA2G4AP47712 749 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 ALDH1A3P47895 512 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 TUFMP49411 452 aaKnown RBP10.29□□□□□ -0.76
CHD8-204ENST00000553622 TKTL1P51854 596 aa10.29□□□□□ -0.76
CHD8-204ENST00000553622 RPL10AP62906 217 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms