RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RWDD2AQ9UIY3 292 aa25.08■■□□□ 1.61
TDP1-205ENST00000553527 KIF26AQ9ULI4 1882 aaPredicted RBP25.08■■□□□ 1.61
TDP1-205ENST00000553527 TADA3O75528 432 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 ABL1P00519 1130 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 CCDC130P13994 396 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 PRKCQQ04759 706 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 WDR44Q5JSH3 913 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 TTI2Q6NXR4 508 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 FOXR2Q6PJQ5 311 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 TTC8Q8TAM2 541 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 C8orf48Q96LL4 319 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 CYP2S1Q96SQ9 504 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 PRRX2Q99811 253 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 NIF3L1Q9GZT8 377 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 MUC6Q6W4X9 2439 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 ATP8B3O60423 1300 aa25.07■■□□□ 1.6
TDP1-205ENST00000553527 KANSL1LA0AUZ9 987 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 H0Y858 1186 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 DDX6P26196 483 aaKnown RBP eCLIP25.06■■□□□ 1.6
TDP1-205ENST00000553527 MCCD1P59942 119 aaPredicted RBP25.06■■□□□ 1.6
TDP1-205ENST00000553527 TCF15Q12870 199 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 ZSCAN23Q3MJ62 389 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 PAQR9Q6ZVX9 377 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 FILIP1Q7Z7B0 1213 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 FAM35AQ86V20 835 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 MON1AQ86VX9 555 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 UNC93AQ86WB7 457 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 CELF5Q8N6W0 485 aaKnown RBP25.06■■□□□ 1.6
TDP1-205ENST00000553527 BPIFB1Q8TDL5 484 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 CSGALNACT1Q8TDX6 532 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 DNASE1L2Q92874 299 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 TATDN2Q93075 761 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 CEP63Q96MT8 703 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 TWNKQ96RR1 684 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 CYP3A43Q9HB55 503 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 CCL26Q9Y258 94 aa25.06■■□□□ 1.6
TDP1-205ENST00000553527 MTF2Q9Y483 593 aaPredicted RBP25.06■■□□□ 1.6
TDP1-205ENST00000553527 GALR2O43603 387 aaPredicted RBP25.05■■□□□ 1.6
TDP1-205ENST00000553527 AP1G2O75843 785 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 CCDC192P0DO97 292 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 ADORA2BP29275 332 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 PLA2G5P39877 138 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 ZNF394Q53GI3 561 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 CT47A1Q5JQC4 288 aaPredicted RBP25.05■■□□□ 1.6
TDP1-205ENST00000553527 FRMD5Q7Z6J6 570 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 FUKQ8N0W3 1084 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 CRYBG2Q8N1P7 616 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 PJA1Q8NG27 643 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 SLC2A14Q8TDB8 520 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 USP13Q92995 863 aaPredicted RBP25.05■■□□□ 1.6
TDP1-205ENST00000553527 SLC22A12Q96S37 553 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 METTL14Q9HCE5 456 aaKnown RBP25.05■■□□□ 1.6
TDP1-205ENST00000553527 ZMYM5Q9UJ78 669 aa25.05■■□□□ 1.6
TDP1-205ENST00000553527 C2orf78A6NCI8 922 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 FAM170BA6NMN3 283 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 CHADO15335 359 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 TRIM21P19474 475 aaKnown RBP25.04■■□□□ 1.6
TDP1-205ENST00000553527 ERCC5P28715 1186 aaPredicted RBP25.04■■□□□ 1.6
TDP1-205ENST00000553527 PTPN5P54829 565 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 FCHO2Q0JRZ9 810 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 NUP93Q8N1F7 819 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 ARL14EPQ8N8R7 260 aaPredicted RBP25.04■■□□□ 1.6
TDP1-205ENST00000553527 DTWD2Q8NBA8 298 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 SLC35C1Q96A29 364 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 SMARCD1Q96GM5 515 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 CEP295NLQ96MC4 621 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 NT5C1AQ9BXI3 368 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 SRRTQ9BXP5 876 aaKnown RBP25.04■■□□□ 1.6
TDP1-205ENST00000553527 KRT82Q9NSB4 513 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 TDP1Q9NUW8 608 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 EHD2Q9NZN4 543 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 TRPM5Q9NZQ8 1165 aa25.04■■□□□ 1.6
TDP1-205ENST00000553527 TRAV19A0A0A6YYK7 116 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 CKMP06732 381 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 WEE1P30291 646 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 KPNA1P52294 538 aaPredicted RBP25.03■■□□□ 1.6
TDP1-205ENST00000553527 NHLH1Q02575 133 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 INCA1Q0VD86 236 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 LRMPQ12912 555 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 TAF10Q12962 218 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 ARHGAP29Q52LW3 1261 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 ZNF852Q6ZMS4 543 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 C11orf57Q6ZUT1 292 aaPredicted RBP25.03■■□□□ 1.6
TDP1-205ENST00000553527 CREBRFQ8IUR6 639 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 THG1LQ9NWX6 298 aaKnown RBP25.03■■□□□ 1.6
TDP1-205ENST00000553527 OBP2AQ9NY56 170 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 NDRG2Q9UN36 371 aaKnown RBP25.03■■□□□ 1.6
TDP1-205ENST00000553527 PIAS3Q9Y6X2 628 aa25.03■■□□□ 1.6
TDP1-205ENST00000553527 BEST1O76090 585 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 HDCP19113 662 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 MAP3K7CLP57077 242 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 TPD52L1Q16890 204 aaPredicted RBP25.02■■□□□ 1.6
TDP1-205ENST00000553527 CCDC105Q8IYK2 499 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 SCAMP5Q8TAC9 235 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 WHAMMQ8TF30 809 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 CYFIP2Q96F07 1278 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 ARID3AQ99856 593 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 DDX23Q9BUQ8 820 aaKnown RBP25.02■■□□□ 1.6
TDP1-205ENST00000553527 LTB4R2Q9NPC1 389 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 DMAP1Q9NPF5 467 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms