RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SPOPLQ6IQ16 392 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
CDK4-215ENST00000553237 GUF1Q8N442 669 aaKnown RBP16.92■□□□□ 0.3
CDK4-215ENST00000553237 MED10Q9BTT4 135 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 ELOVL4Q9GZR5 314 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 TRPM5Q9NZQ8 1165 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 GCNT4Q9P109 453 aa16.92■□□□□ 0.3
CDK4-215ENST00000553237 PATJQ8NI35 1801 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 GOLGA6L4A6NEF3 574 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 ABL1P00519 1130 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 HLA-DRAP01903 254 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 PIK3CAP42336 1068 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 SATB1Q01826 763 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 IFRD2Q12894 506 aaPredicted RBP16.91■□□□□ 0.3
CDK4-215ENST00000553237 ORC1Q13415 861 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 ADAM9Q13443 819 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 PNOCQ13519 176 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 MTF1Q14872 753 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 Q6ZS52 159 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 ACOT1Q86TX2 421 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 FAM186BQ8IYM0 893 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 CCDC34Q96HJ3 373 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 CEP295NLQ96MC4 621 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 MMRN2Q9H8L6 949 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
CDK4-215ENST00000553237 PCDHGA2Q9Y5H1 932 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 DENND4CQ5VZ89 1909 aa16.91■□□□□ 0.3
CDK4-215ENST00000553237 EP300Q09472 2414 aaPredicted RBP16.91■□□□□ 0.3
CDK4-215ENST00000553237 ZNF638Q14966 1978 aaKnown RBP16.9■□□□□ 0.3
CDK4-215ENST00000553237 IKBKBO14920 756 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 KRT13P13646 458 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 P4HA1P13674 534 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
CDK4-215ENST00000553237 CXCL12P48061 93 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 GCLMP48507 274 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 CCR3P51677 355 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 NOP14P78316 857 aaKnown RBP16.9■□□□□ 0.3
CDK4-215ENST00000553237 TAF10Q12962 218 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 ZNF77Q15935 545 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 NFIL3Q16649 462 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 DGKKQ5KSL6 1271 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 FMR1NBQ8N0W7 255 aaPredicted RBP16.9■□□□□ 0.3
CDK4-215ENST00000553237 ZBTB44Q8NCP5 570 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 SH3RF2Q8TEC5 729 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 KCNK16Q96T55 309 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 HINFPQ9BQA5 517 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 IER2Q9BTL4 223 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 TTLL2Q9BWV7 592 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 DUS2Q9NX74 493 aaKnown RBP16.9■□□□□ 0.3
CDK4-215ENST00000553237 EHD2Q9NZN4 543 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 WNT6Q9Y6F9 365 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 OBSL1O75147 1896 aa16.9■□□□□ 0.3
CDK4-215ENST00000553237 ZNF840PA6NDX5 716 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 MAPK13O15264 365 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 ASS1P00966 412 aaKnown RBP16.89■□□□□ 0.29
CDK4-215ENST00000553237 TDGF1P13385 188 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
CDK4-215ENST00000553237 NDST1P52848 882 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 PPP3CAQ08209 521 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 PPP2R5DQ14738 602 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 PDGFRLQ15198 375 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 MAMSTRQ6ZN01 415 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 PAQR9Q6ZVX9 377 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 INTS8Q75QN2 995 aaKnown RBP16.89■□□□□ 0.29
CDK4-215ENST00000553237 FAM35AQ86V20 835 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 SPEM1Q8N4L4 309 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 SUMF1Q8NBK3 374 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 OSCP1Q8WVF1 389 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 TAF4BQ92750 862 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 NELL1Q92832 810 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 ERCC4Q92889 916 aaPredicted RBP16.89■□□□□ 0.29
CDK4-215ENST00000553237 CHFRQ96EP1 664 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 TNIP3Q96KP6 325 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 C2orf42Q9NWW7 574 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 HMGXB4Q9UGU5 601 aa16.89■□□□□ 0.29
CDK4-215ENST00000553237 GVINP1Q7Z2Y8 2422 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 CCDC130P13994 396 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 IFNAR2P48551 515 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 ZXDBP98169 803 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 USP4Q13107 963 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 CCINQ13939 588 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 ZCWPW2Q504Y3 356 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 NAIF1Q69YI7 327 aaPredicted RBP16.88■□□□□ 0.29
CDK4-215ENST00000553237 FUKQ8N0W3 1084 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 TAS1R2Q8TE23 839 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 RNF38Q9H0F5 515 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 LINC00597Q9H2U6 94 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 ECT2Q9H8V3 914 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 FBRSL1Q9HCM7 1045 aaKnown RBP16.88■□□□□ 0.29
CDK4-215ENST00000553237 ARHGAP26Q9UNA1 814 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 ATP8B3O60423 1300 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 KIF26AQ9ULI4 1882 aaPredicted RBP16.88■□□□□ 0.29
CDK4-215ENST00000553237 GREB1Q4ZG55 1949 aa16.88■□□□□ 0.29
CDK4-215ENST00000553237 GPR179Q6PRD1 2367 aa16.87■□□□□ 0.29
CDK4-215ENST00000553237 LEFTY2O00292 366 aa16.87■□□□□ 0.29
CDK4-215ENST00000553237 LILRB5O75023 590 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms