RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ARHGAP40Q5TG30 622 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 TRIM68Q6AZZ1 485 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 ARMCX5Q6P1M9 558 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 GAREM2Q75VX8 874 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 TRMT11Q7Z4G4 463 aaKnown RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 USP37Q86T82 979 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 MARCH9Q86YJ5 346 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 SPACA3Q8IXA5 215 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 ZNF248Q8NDW4 579 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 ZDHHC1Q8WTX9 485 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 OSCP1Q8WVF1 389 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 HMGB4Q8WW32 186 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 LIN37Q96GY3 246 aaPredicted RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 TMEM87BQ96K49 555 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 ESYT1Q9BSJ8 1104 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 GAREM1Q9H706 876 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 GPRC5CQ9NQ84 441 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 PRMT7Q9NVM4 692 aaPredicted RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 RBM28Q9NW13 759 aaKnown RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 FAM13BQ9NYF5 915 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 NFE2L3Q9Y4A8 694 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 PAXBP1Q9Y5B6 917 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 PCDHGA1Q9Y5H4 931 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 USP3Q9Y6I4 520 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 NCANO14594 1321 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 ATXN2Q99700 1313 aaKnown RBP5.63□□□□□ -1.51
CKAP4-203ENST00000553039 NOTCH4Q99466 2003 aa5.63□□□□□ -1.51
CKAP4-203ENST00000553039 TEX15Q9BXT5 2789 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 THADAQ6YHU6 1953 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 PI4KAP42356 2102 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 LOC400499M0QZD8 3231 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 A0A0A0MRY4 1105 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 OR6C75A6NL08 312 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 E7EWF7 191 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 I3L4J1 428 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 K7EQS6 105 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TBX3O15119 743 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 CILPO75339 1184 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 PSMD10O75832 226 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 RECQL4O94761 1208 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 CLSTN1O94985 981 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 OAZ2O95190 189 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 KLF8O95600 359 aaPredicted RBP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 ARSAP15289 507 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 U2AF2P26368 475 aaKnown RBP eCLIP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 MCM5P33992 734 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TNFRSF4P43489 277 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 SKOR1P84550 965 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TARDBPQ13148 414 aaKnown RBP eCLIP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 ZNF268Q14587 947 aaPredicted RBP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 EMC2Q15006 297 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TLR1Q15399 786 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 NAB2Q15742 525 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 HLA-BQ31612 363 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 INAVAQ3KP66 663 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 XKR9Q5GH70 373 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 STXBP5Q5T5C0 1151 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 CENPPQ6IPU0 288 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 CD300LGQ6UXG3 332 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TMTC3Q6ZXV5 915 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 CDR2LQ86X02 465 aaPredicted RBP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TMC8Q8IU68 726 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 C4orf19Q8IY42 314 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 LSMEM2Q8N112 164 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 REXO1Q8N1G1 1221 aaKnown RBP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 CACTIN-AS1Q8N1I8 211 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 FRMD1Q8N878 549 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 ZNF513Q8N8E2 541 aaPredicted RBP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 MAB21L3Q8N8X9 362 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TXNDC5Q8NBS9 432 aaKnown RBP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 BEST2Q8NFU1 509 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 EXOC6Q8TAG9 804 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 MRFAP1L1Q96HT8 127 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 NACC1Q96RE7 527 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 LGMNQ99538 433 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 C22orf23Q9BZE7 217 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 DPH1Q9BZG8 443 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TOPORSQ9NS56 1045 aaPredicted RBP5.62□□□□□ -1.51
CKAP4-203ENST00000553039 TOR4AQ9NXH8 423 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 YIPF1Q9Y548 306 aa5.62□□□□□ -1.51
CKAP4-203ENST00000553039 hCG_2014768A0A024R1R8 64 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 SMIM28A0A1B0GU29 152 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 TCRBV21S2A2A0A5A6 115 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ESYT2A0FGR8 921 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 PODXLO00592 558 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 DFNA5O60443 496 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ANKRD17O75179 2603 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 DGAT1O75907 488 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 PRAMEF12O95522 483 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 NFATC1O95644 943 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 APODP05090 189 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 CR2P20023 1033 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 YWHABP31946 246 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 ADD1P35611 737 aaKnown RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 GRK6P43250 576 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 YWHAHQ04917 246 aaPredicted RBP5.61□□□□□ -1.51
CKAP4-203ENST00000553039 NFATC3Q12968 1075 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 GRIK2Q13002 908 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 NR5A1Q13285 461 aa5.61□□□□□ -1.51
CKAP4-203ENST00000553039 CLN3Q13286 438 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms