RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ARHGAP15Q53QZ3 475 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 ARHGAP17Q68EM7 881 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 PHLDB3Q6NSJ2 640 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 TMEM270Q6UE05 265 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 CYFIP2Q96F07 1278 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 KREMEN1Q96MU8 473 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 HSD3B7Q9H2F3 369 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 PNPLA8Q9NP80 782 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 LIMD1Q9UGP4 676 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 KMT2EQ8IZD2 1858 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 SOBPA7XYQ1 873 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 PES1O00541 588 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 RTN3O95197 1032 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 CAVIN2O95810 425 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 F11P03951 625 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ASGR2P07307 311 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ALADP13716 330 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 NPR3P17342 541 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 SLC9A1P19634 815 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 RFX1P22670 979 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 DDX6P26196 483 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ADORA2BP29275 332 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ZNF165P49910 485 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ZNF132P52740 706 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 MFAP3P55082 362 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 PPP1R26Q5T8A7 1209 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 CLEC20AQ6ZU45 233 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 TMEM150AQ86TG1 271 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 DHX40Q8IX18 779 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ZMIZ2Q8NF64 920 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 KHSRPQ92945 711 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 KAT5Q92993 513 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 HEXIM2Q96MH2 286 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ASB16Q96NS5 453 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 SMOQ99835 787 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 ATXN3LQ9H3M9 355 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 SLITRK6Q9H5Y7 841 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 KCNK12Q9HB15 430 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 TRPV4Q9HBA0 871 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 SIX2Q9NPC8 291 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 LIMA1Q9UHB6 759 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 MAGED2Q9UNF1 606 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 CNTN6Q9UQ52 1028 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 PCDHB4Q9Y5E5 795 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 COL4A3Q01955 1670 aa12.41□□□□□ -0.42
TRAFD1-209ENST00000552896 NCANO14594 1321 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 SMTNL1A8MU46 457 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 LGALS16A8MUM7 142 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 PI4K2BG5E9Z4 385 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 TNFRSF10BO14763 440 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 ECI2O75521 394 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 VDRP11473 427 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 GJA1P17302 382 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 FCARP24071 287 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 WEE1P30291 646 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 PPP3CCP48454 512 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 COPB1P53618 953 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 SLC5A3P53794 718 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 BCAT1P54687 386 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 USP46P62068 366 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 CYP4F8P98187 520 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 TDGQ13569 410 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 STILQ15468 1287 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 NFKBIBQ15653 356 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 SGO2Q562F6 1265 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 FAM78AQ5JUQ0 283 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 STXBP5Q5T5C0 1151 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 GPR158Q5T848 1215 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 PARM1Q6UWI2 310 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 UBALD2Q8IYN6 164 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 NUP93Q8N1F7 819 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 ZSCAN18Q8TBC5 510 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 OVCA2Q8WZ82 227 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 FGF14Q92915 247 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 SMARCD2Q92925 531 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 MCRS1Q96EZ8 462 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 KCNK16Q96T55 309 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 COMMD8Q9NX08 183 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 KIAA1257Q9ULG3 409 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 DUSP12Q9UNI6 340 aa12.4□□□□□ -0.42
TRAFD1-209ENST00000552896 FAM92AA1XBS5 289 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 O00370 1275 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 BEST1O76090 585 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 CD19P15391 556 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 PFKLP17858 780 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 PDE6CP51160 858 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 MAP3K7CLP57077 242 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 GOLGA7BQ2TAP0 167 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 FKBP15Q5T1M5 1219 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 GJB7Q6PEY0 223 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 PDZD8Q8NEN9 1154 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 SHC3Q92529 594 aa12.39□□□□□ -0.43
TRAFD1-209ENST00000552896 E2F7Q96AV8 911 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms