RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NAT10Q9H0A0 1025 aaKnown RBP19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 TRPC7Q9HCX4 862 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 SAMSN1Q9NSI8 373 aaKnown RBP19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 TRPM5Q9NZQ8 1165 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 PCDHB4Q9Y5E5 795 aa19.58■□□□□ 0.72
PRPF40B-216ENST00000552301 GTPBP10A4D1E9 387 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 PRR33A8MZF0 331 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 CFHP08603 1231 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 FCARP24071 287 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 EEF1GP26641 437 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 PDE6CP51160 858 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 MAP3K7CLP57077 242 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 SLC8A3P57103 927 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 USP46P62068 366 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 GCNT1Q02742 428 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 EXOC3L4Q17RC7 722 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 KLHL40Q2TBA0 621 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 POTEHQ6S545 545 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 TMEM270Q6UE05 265 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 RRAGAQ7L523 313 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 MAB21L3Q8N8X9 362 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 ANKRD20A12PQ8NF67 263 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 DEPDC1BQ8WUY9 529 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 FBXO32Q969P5 355 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 JAKMIP2Q96AA8 810 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 FAM81BQ96LP2 452 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 MFSD1Q9H3U5 465 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 TRPV4Q9HBA0 871 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 TMEM30AQ9NV96 361 aa19.57■□□□□ 0.72
PRPF40B-216ENST00000552301 TRAV19A0A0A6YYK7 116 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 SOBPA7XYQ1 873 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 HEPACAM2A8MVW5 462 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 TADA3O75528 432 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 NPR3P17342 541 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 RFX1P22670 979 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 YWHAQP27348 245 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 VIPR2P41587 438 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 PPP3CCP48454 512 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 SLC5A3P53794 718 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 PFKPQ01813 784 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 MYL5Q02045 173 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 VWA3BQ502W6 1294 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 SGO2Q562F6 1265 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 TCP11X2Q5H9J9 407 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 PPP1R26Q5T8A7 1209 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 TXNDC8Q6A555 127 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 TMEM150AQ86TG1 271 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 MON1AQ86VX9 555 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 ARHGEF19Q8IW93 802 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 CMTM8Q8IZV2 173 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 PDZD8Q8NEN9 1154 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 PBXIP1Q96AQ6 731 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 SMOQ99835 787 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 TRMT61BQ9BVS5 477 aaKnown RBP19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 NDST4Q9H3R1 872 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 BRD9Q9H8M2 597 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 C11orf16Q9NQ32 467 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 SLC2A4RGQ9NR83 387 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 GREB1Q4ZG55 1949 aa19.56■□□□□ 0.72
PRPF40B-216ENST00000552301 OBSL1O75147 1896 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 LETM1O95202 739 aaPredicted RBP19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 ABL1P00519 1130 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 CKMP06732 381 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 PSMC3P17980 439 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 GPC5P78333 572 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 TAF10Q12962 218 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 GRM2Q14416 872 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 ARHGAP17Q68EM7 881 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 TRIM65Q6PJ69 517 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 CLEC20AQ6ZU45 233 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 ENOSF1Q7L5Y1 443 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 SUGP1Q8IWZ8 645 aaKnown RBP19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 UBR7Q8N806 425 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 NUP210Q8TEM1 1887 aaPredicted RBP19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 KAT5Q92993 513 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 LRFN3Q9BTN0 628 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 SLC46A2Q9BY10 475 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 PLA2G2FQ9BZM2 168 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 FBXO44Q9H4M3 255 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 CSNK1G1Q9HCP0 422 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 UBE2TQ9NPD8 197 aaPredicted RBP19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 COMMD8Q9NX08 183 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 WNT16Q9UBV4 365 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 HESX1Q9UBX0 185 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 ZNF638Q14966 1978 aaKnown RBP19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 DENND4CQ5VZ89 1909 aa19.55■□□□□ 0.72
PRPF40B-216ENST00000552301 PAEPP09466 180 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 VDRP11473 427 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 KRT5P13647 590 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 WEE1P30291 646 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 MFAP3P55082 362 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 VITQ6UXI7 678 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 GPIHBP1Q8IV16 184 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 CELF5Q8N6W0 485 aaKnown RBP19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 RBBP8NLQ8NC74 664 aaPredicted RBP19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 ZMIZ2Q8NF64 920 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 ASIC4Q96FT7 647 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 DUSP16Q9BY84 665 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 KIF9Q9HAQ2 790 aa19.54■□□□□ 0.72
PRPF40B-216ENST00000552301 PNPLA8Q9NP80 782 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms