RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 PIGKQ92643 395 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 SPATA17Q96L03 361 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 CBWD1Q9BRT8 395 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 SCNM1Q9BWG6 230 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 FGFBP2Q9BYJ0 223 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 ADAM33Q9BZ11 813 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 MTMR12Q9C0I1 747 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 PCIF1Q9H4Z3 704 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 TMEM74BQ9NUR3 256 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 MAGEC2Q9UBF1 373 aaPredicted RBP23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 SEL1LQ9UBV2 794 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 EXOC7Q9UPT5 735 aa23.17■■□□□ 1.3
SMARCD1-212ENST00000551966 BMP15O95972 392 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 CYP17A1P05093 508 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 HOXB3P14651 431 aaPredicted RBP23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 BDNFP23560 247 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 PSMC1P62191 440 aaKnown RBP23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 MRPS21P82921 87 aaKnown RBP23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 UAP1L1Q3KQV9 507 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 LMBRD2Q68DH5 695 aaPredicted RBP23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 FILIP1Q7Z7B0 1213 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 TTC30AQ86WT1 665 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 DEFB124Q8NES8 71 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 GATA6Q92908 595 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 FNBP1Q96RU3 617 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 SYT15Q9BQS2 421 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 CEP295Q9C0D2 2601 aa23.16■■□□□ 1.3
SMARCD1-212ENST00000551966 SGK1O00141 431 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 PDGFRBP09619 1106 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 GRIK1P39086 918 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 P2RY2P41231 377 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 DHCR24Q15392 516 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 LARP1BQ659C4 914 aaKnown RBP23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 VSTM1Q6UX27 236 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 C4orf50Q6ZRC1 276 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 DPH6Q7L8W6 267 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 ALLCQ8N6M5 410 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 IL17RCQ8NAC3 791 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 MYLPFQ96A32 169 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 TRPM5Q9NZQ8 1165 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 EVLQ9UI08 416 aaPredicted RBP23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 MBD1Q9UIS9 605 aaPredicted RBP23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 CDH9Q9ULB4 789 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 CACNA1GO43497 2377 aa23.15■■□□□ 1.3
SMARCD1-212ENST00000551966 PTPRJQ12913 1337 aa23.14■■□□□ 1.3
SMARCD1-212ENST00000551966 HELZP42694 1942 aaKnown RBP23.14■■□□□ 1.3
SMARCD1-212ENST00000551966 A0A0A0MRY4 1105 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 ZNF840PA6NDX5 716 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 GCNT3O95395 438 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 GAP43P17677 238 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 PFKLP17858 780 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 PTGER3P43115 390 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 SLC7A9P82251 487 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 RABEP1Q15276 862 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 RHBDF2Q6PJF5 856 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 DENND5BQ6ZUT9 1274 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 C12orf40Q86WS4 652 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 TMEFF1Q8IYR6 380 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 TXNDC5Q8NBS9 432 aaKnown RBP23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 OR5B17Q8NGF7 314 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 HPDLQ96IR7 371 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 TTLL2Q9BWV7 592 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 STK17AQ9UEE5 414 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 NME7Q9Y5B8 376 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 PCDHB13Q9Y5F0 798 aa23.14■■□□□ 1.29
SMARCD1-212ENST00000551966 SCAMP3O14828 347 aaKnown RBP23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 KLF8O95600 359 aaPredicted RBP23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 OLFM2O95897 454 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 TMEM191BP0C7N4 346 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 TIE1P35590 1138 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 KIR2DL1P43626 348 aaPredicted RBP23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 PDE6CP51160 858 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 C8orf34Q49A92 452 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 TRIM61Q5EBN2 209 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 SYCP3Q8IZU3 236 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 NOC3LQ8WTT2 800 aaKnown RBP23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 CEP295NLQ96MC4 621 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 PNKPQ96T60 521 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 ZDHHC4Q9NPG8 344 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 OLFML3Q9NRN5 406 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 INTS13Q9NVM9 706 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 CPQQ9Y646 472 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 CLIC4Q9Y696 253 aa23.13■■□□□ 1.29
SMARCD1-212ENST00000551966 TNFRSF10BO14763 440 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 KAT7O95251 611 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 SV2BQ7L1I2 683 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 ARMCX6Q7L4S7 300 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 LPCAT2Q7L5N7 544 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 KIAA1958Q8N8K9 716 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 PCED1BQ96HM7 432 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 SMPD4Q9NXE4 827 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 SMC3Q9UQE7 1217 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 ZZEF1O43149 2961 aa23.12■■□□□ 1.29
SMARCD1-212ENST00000551966 SRRM3A6NNA2 597 aaPredicted RBP23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 ADAM23O75077 832 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 ALDH1A2O94788 518 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 PRPF6O94906 941 aaKnown RBP23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 WARSP23381 471 aaKnown RBP23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 CYP27A1Q02318 531 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms