RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 HAO1Q9UJM8 370 aa9.64□□□□□ -0.87
UBE2N-205ENST00000550657 COL11A1P12107 1806 aaPredicted RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 PHIPQ8WWQ0 1821 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 CFAP73A6NFT4 308 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 MBTD1Q05BQ5 628 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 GALNTL6Q49A17 601 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 SH3D19Q5HYK7 790 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 MAP1SQ66K74 1059 aaPredicted RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 KIRREL3Q8IZU9 778 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 ANKLE1Q8NAG6 615 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 ATP11CQ8NB49 1132 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 AGAP11Q8TF27 550 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 CFAP36Q96G28 342 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 TMEM176AQ96HP8 235 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 PEBP4Q96S96 227 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 MMP19Q99542 508 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 WDR83Q9BRX9 315 aaKnown RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 NGRNQ9NPE2 291 aaKnown RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 SLC17A7Q9P2U7 560 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 ACTL7BQ9Y614 415 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 E5RJQ4 531 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 SOCS7O14512 581 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 B4GALT4O60513 344 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 FGFR1P11362 822 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 PDGFRAP16234 1089 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 PHBP35232 272 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 NR1H3Q13133 447 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 GRM1Q13255 1194 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 KRT81Q14533 505 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 NOL9Q5SY16 702 aaKnown RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 BBS12Q6ZW61 710 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 IGDCC3Q8IVU1 814 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 PDIK1LQ8N165 341 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 NIPA2Q8N8Q9 360 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 GBP7Q8N8V2 638 aaPredicted RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 HPDLQ96IR7 371 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 FZD8Q9H461 694 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 PTPRHQ9HD43 1115 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 FAM49BQ9NUQ9 324 aa9.63□□□□□ -0.87
UBE2N-205ENST00000550657 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
UBE2N-205ENST00000550657 CBX6O95503 412 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 ZNF286BP0CG31 522 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 INSRRP14616 1297 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 CDH5P33151 784 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 ELK3P41970 407 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 NDST1P52848 882 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 ROR1Q01973 937 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 RNASELQ05823 741 aaKnown RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 TMEM62Q0P6H9 643 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 R3HDM1Q15032 1099 aaKnown RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 SMAD1Q15797 465 aaKnown RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 PREPLQ4J6C6 727 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 SULF1Q8IWU6 871 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 CTAGE3PQ8IX95 158 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 NAT8LQ8N9F0 302 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 TCP10LQ8TDR4 215 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 DENND1AQ8TEH3 1009 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 RXFP2Q8WXD0 754 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 FAF2Q96CS3 445 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 LRRC37BQ96QE4 947 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 MIS12Q9H081 205 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 SMG5Q9UPR3 1016 aaKnown RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 IKBKGQ9Y6K9 419 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 FAM155BO75949 473 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 TRUB2O95900 331 aaKnown RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 SLC8A1P32418 973 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 DPYSL3Q14195 570 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 AMHR2Q16671 573 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 PPP6R3Q5H9R7 873 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 POLNQ7Z5Q5 900 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 PCGF5Q86SE9 256 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 TTC13Q8NBP0 860 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 KCNV2Q8TDN2 545 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 ZNF75CPQ92670 426 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 N4BP2L2Q92802 583 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 TTC17Q96AE7 1141 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 SMARCAD1Q9H4L7 1026 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 UBN1Q9NPG3 1134 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 RAB6BQ9NRW1 208 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 CHKBQ9Y259 395 aa9.62□□□□□ -0.87
UBE2N-205ENST00000550657 MYH9P35579 1960 aaKnown RBP9.62□□□□□ -0.87
UBE2N-205ENST00000550657 A0A0G2JND7 137 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 KCNN4O15554 427 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 PRPF4O43172 522 aaKnown RBP eCLIP9.61□□□□□ -0.876e-7■■■■□ 23.2
UBE2N-205ENST00000550657 PRPSAP2O60256 369 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 CILPO75339 1184 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 CNMDO75829 334 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 MT-ND3P03897 115 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 PROZP22891 400 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 PDK4Q16654 411 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 ZC3H12AQ5D1E8 599 aaKnown RBP9.61□□□□□ -0.87
UBE2N-205ENST00000550657 FAM183BPQ6ZVS7 135 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 OTOAQ7RTW8 1153 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 DCPSQ96C86 337 aaKnown RBP9.61□□□□□ -0.87
UBE2N-205ENST00000550657 FGD4Q96M96 766 aa9.61□□□□□ -0.87
UBE2N-205ENST00000550657 MPHOSPH6Q99547 160 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms