RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ASIC4Q96FT7 647 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 RPP25Q9BUL9 199 aaKnown RBP27.5■■□□□ 1.99
CPSF6-205ENST00000550075 TMEM30AQ9NV96 361 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 TRPM5Q9NZQ8 1165 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 TRIOO75962 3097 aa27.5■■□□□ 1.99
CPSF6-205ENST00000550075 EEF1GP26641 437 aaKnown RBP27.49■■□□□ 1.99
CPSF6-205ENST00000550075 PDE6CP51160 858 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 RAD23BP54727 409 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 BMP8AQ7Z5Y6 402 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 MON1AQ86VX9 555 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 ARID3BQ8IVW6 561 aaPredicted RBP27.49■■□□□ 1.99
CPSF6-205ENST00000550075 SLC4A11Q8NBS3 891 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 PDZD8Q8NEN9 1154 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 FAM81BQ96LP2 452 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 LRFN3Q9BTN0 628 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 CSNK1G1Q9HCP0 422 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 COMMD8Q9NX08 183 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 OBP2AQ9NY56 170 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 WNT16Q9UBV4 365 aa27.49■■□□□ 1.99
CPSF6-205ENST00000550075 ZNF638Q14966 1978 aaKnown RBP27.49■■□□□ 1.99
CPSF6-205ENST00000550075 PATJQ8NI35 1801 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 KCNJ18B7U540 433 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 TADA3O75528 432 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 CFHP08603 1231 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 IFRD2Q12894 506 aaPredicted RBP27.48■■□□□ 1.99
CPSF6-205ENST00000550075 KCNJ12Q14500 433 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 YAF2Q8IY57 180 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 CMTM8Q8IZV2 173 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 MAB21L3Q8N8X9 362 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 PBXIP1Q96AQ6 731 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 KCNK16Q96T55 309 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 SMOQ99835 787 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 TUBGCP2Q9BSJ2 902 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 TRMT61BQ9BVS5 477 aaKnown RBP27.48■■□□□ 1.99
CPSF6-205ENST00000550075 MFSD1Q9H3U5 465 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 KIF9Q9HAQ2 790 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 TRPC7Q9HCX4 862 aa27.48■■□□□ 1.99
CPSF6-205ENST00000550075 PSMC3P17980 439 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 YWHAQP27348 245 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 VIPR2P41587 438 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 SLC5A3P53794 718 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 MAP3K7CLP57077 242 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 SLC8A3P57103 927 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 USP46P62068 366 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 EXOC3L4Q17RC7 722 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 KLHL40Q2TBA0 621 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 HSP90AA4PQ58FG1 418 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 ENOSF1Q7L5Y1 443 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 MFSD6LQ8IWD5 586 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 SUGP1Q8IWZ8 645 aaKnown RBP27.47■■□□□ 1.99
CPSF6-205ENST00000550075 UBR7Q8N806 425 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 OVCA2Q8WZ82 227 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 FBXO32Q969P5 355 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 SLC46A2Q9BY10 475 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 NAT10Q9H0A0 1025 aaKnown RBP27.47■■□□□ 1.99
CPSF6-205ENST00000550075 PNPLA8Q9NP80 782 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 PCDHB4Q9Y5E5 795 aa27.47■■□□□ 1.99
CPSF6-205ENST00000550075 TRAV19A0A0A6YYK7 116 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 HEPACAM2A8MVW5 462 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 TPM2P07951 284 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 CD19P15391 556 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 NPR3P17342 541 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 PFKLP17858 780 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 GPC5P78333 572 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 MYL5Q02045 173 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 TYRO3Q06418 890 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 SGO2Q562F6 1265 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 PPP1R26Q5T8A7 1209 aaPredicted RBP27.46■■□□□ 1.99
CPSF6-205ENST00000550075 ARHGAP17Q68EM7 881 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 TXNDC8Q6A555 127 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 TMEM270Q6UE05 265 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 VITQ6UXI7 678 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 CLEC20AQ6ZU45 233 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 C11orf57Q6ZUT1 292 aaPredicted RBP27.46■■□□□ 1.99
CPSF6-205ENST00000550075 HFE2Q6ZVN8 426 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 ARHGEF19Q8IW93 802 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 CELF5Q8N6W0 485 aaKnown RBP27.46■■□□□ 1.99
CPSF6-205ENST00000550075 JAKMIP2Q96AA8 810 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 PLA2G2FQ9BZM2 168 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 NDST4Q9H3R1 872 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 FBXO44Q9H4M3 255 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 BRD9Q9H8M2 597 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 SAMSN1Q9NSI8 373 aaKnown RBP27.46■■□□□ 1.99
CPSF6-205ENST00000550075 KIAA1257Q9ULG3 409 aa27.46■■□□□ 1.99
CPSF6-205ENST00000550075 PES1O00541 588 aaKnown RBP27.45■■□□□ 1.98
CPSF6-205ENST00000550075 CKMP06732 381 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 PAEPP09466 180 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 USP17L7P0C7H9 530 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 TAF10Q12962 218 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 GRM2Q14416 872 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 VWA3BQ502W6 1294 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 TCP11X2Q5H9J9 407 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 TRIM65Q6PJ69 517 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 RRAGAQ7L523 313 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 SIX5Q8N196 739 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 ZMIZ2Q8NF64 920 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 DNASE1L2Q92874 299 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 CRACR2AQ9BSW2 395 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 DUSP16Q9BY84 665 aa27.45■■□□□ 1.98
CPSF6-205ENST00000550075 ARHGEF3Q9NR81 526 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms